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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 10,115
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000002009
Taxonomy296587 - Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709)
StrainRCC299 / NOUM17
Last modifiedJune 28, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000090985.2 from ENA/EMBL full
BuscoC:98%[S:97.2%,D:0.7%],F:1.1%,M:1%,n:1519
CompletenessClose to Standard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Mitochondrion33
Chromosome 2951
Chromosome 3867
Chromosome 4782
Chromosome 5742
Chromosome 6697
Chromosome 7709
Chromosome 9643
Chromosome 11607
Chromosome 13492
Chromosome 14407
Chromosome 15358
Chromosome 16296
Chromosome 1784
Chromosome 1762
Chromosome 8573
Chromosome 10554
Chromosome 12507
Chloroplast56

Publications

  1. "Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas."
    Worden A.Z., Lee J.-H., Mock T., Rouze P., Simmons M.P., Aerts A.L., Allen A.E., Cuvelier M.L., Derelle E., Everett M.V., Foulon E., Grimwood J., Gundlach H., Henrissat B., Napoli C., McDonald S.M., Schnitzler Parker M., Rombauts S.
    Grigoriev I.V.
    Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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