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StatusReference proteome
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001962
Taxonomy187272 - Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
StrainATCC BAA-1101 / DSM 17681 / MLHE-1
Last modifiedFebruary 27, 2018
Genome assembly and annotationi GCA_000014785.1 from ENA/EMBL

An anaerobic, facultatively autotrophic arsenite oxidizing bacterium that respires nitrate or nitrite. The cells are short motile rods. It was isolated from bottom waters of Mono Lake, California USA, a stratified soda lake with high pH and high salt levels. It is a gamma-Proteobacterium located in the Ectothiorhodospira clade of photosynthetic bacteria that occur in soda lakes. However, strain MLHE-1 is not a phototroph, but does grow as an anaerobic chemoautotroph by linking oxidation of arsenite (As III), hydrogen, or sulfide to the reduction of nitrate. It contains Form 1 RuBisCo genes for fixation of CO2 during chemoautotrophic growth, but can also grow as a heterotroph on acetate either with nitrate or air. However, arsenite is only oxidized under anaerobic conditions. This strain is very likely to be helpful to our understanding of As-mobility in subsurface waters.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
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Main funding by: National Institutes of Health

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