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Overview

StatusReference proteome
Proteinsi5,921
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001936
Taxonomy347834 - Rhizobium etli (strain CFN 42 / ATCC 51251)
StrainCFN 42 / ATCC 51251
Last modifiedOctober 12, 2018
Genome assembly and annotationi GCA_000092045.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Rhizobium etli (strain CFN 42 / ATCC 51251) pan proteome (fasta)

Rhizobium etli, a soil-dwelling, symbiotic nitrogen-fixing bacterium, is the main nodulator of Phaseolus vulgaris, the common bean. It contains one chromosome and 6 large plasmids, which contribute approximately one third of the genome. This strain is of considerable agronomic importance.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome4012
Plasmid p42a165
Plasmid p42b162
Plasmid p42c232
Plasmid sym p42d329
Plasmid p42e455
Plasmid p42f567
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Main funding by: National Institutes of Health

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