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Overview

StatusReference proteome
Proteinsi21,177
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001811
Taxonomy9986 - Oryctolagus cuniculus
StrainThorbecke inbred
Last modifiedOctober 22, 2018
Genome assembly and annotationi GCA_000003625.1 from Ensembl

The European rabbit is a species belonging to the Leporidae family and is represented by wild as well as domesticated animals. Although it has been hunted by humans for a long time, rabbits were domesticated only in the 5th century by French monks. Nowadays rabbits are kept as pets or food animals across the world. The rabbit is commonly used as a model organism in a wide range of disciplines, including embryology, ophthalmology, neurology, immunology, and especially in toxicology for testing consumer products.

The rabbit genome has 21 pairs of autosomes and two sex chromosomes containing 3.5 Gb with 27,000 protein-coding genes. The reference proteome is derived from the genome sequence submitted in 2009 to the EMBL/GenBank/DDBJ databases.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 11567
Chromosome 21009
Chromosome 3811
Chromosome 4823
Chromosome 5355
Chromosome 6247
Chromosome 7817
Chromosome 8510
Chromosome 9745
Chromosome 10270
Chromosome 11310
Chromosome 12991
Chromosome 131400
Chromosome 14765
Chromosome 15476
Chromosome 16483
Chromosome 17718
Chromosome 18541
Chromosome 19871
Chromosome 20202
Chromosome 21185
Chromosome X666
Mitochondrion13
Unplaced
6405
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Main funding by: National Institutes of Health

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