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Overview

StatusReference proteome
Proteinsi572
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001806
Taxonomy107806 - Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
StrainAPS
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000009605.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) pan proteome (fasta)

Pea aphids are a major agricultural pest, feeding on a variety of legumes (Fabaceae) worldwide. Plant phloem sap feeding insects such as pea aphids depend on their obligate endosymbionts to furnish them with essential amino acids and/or vitamin cofactors. Pea aphids have only one major, often sole microbial symbiont, Buchnera, a maternally-transmitted gammaproteobacteria related to the Enterobacteriaceae. Depending on the aphid-Buchnera pair the capacity to synthesize at least 5 essential amino acids can be shared between the 2 partners. The aphid-Buchnera association has persisted for at least 160 million years and is obligate for both partners. This strain is an endosymbiont of the pea aphid Acyrthosiphon pisum, and was isolated from aphids growing on Vicia faba (L.) (adapted from PMIDs 10993077 and 21392141). Buchnera from A. pisum and S. graminum have a three membrane system (one originating from the host, see PMID 22229056).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome563
Plasmid pLeu7
Plasmid pTrp2

Publications

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 2000:81-86(2000) [PubMed] [Europe PMC] [Abstract]
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