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Overview

Proteinsi5,738
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001734
Taxonomy507522 - Klebsiella pneumoniae (strain 342)
Strain342
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000019565.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) pan proteome (fasta)

Bacteria of the genus Klebsiella are widely distributed in nature, in the soil and in water. They are also part of the normal flora of the intestinal tract, but usually in low numbers compared with E. coli. Klebsiella, especially strains of the species K. pneumonia, are opportunistic pathogens that can cause pneumonia, urinary tract infections, and bacteremia. In recent years there has been an increase in Klebsiella infections, especially in hospitals and due to multiple-antibiotic resistant strains. The most striking difference between most strains of Klebsiella and its close relatives E. coli and Salmonella is that Klebsiella cells have a thick coat of slime or extracellular polysaccharide which is called a "capsule". The capsule protects the cells from dessication, and may also protect them from phagocytosis when they are in an animal host. Surprisingly, many strains of Klebsiella can fix nitrogen, i.e., they can reduce atmospheric nitrogen to ammonia and amino acids.

Strain 342 was isolated from the interior of nitrogen-efficient maize plants whilst looking for nitrogen-fixing endophytes to reduce the amount of nitrogen fertilizers. It can also colonize and provide a small amount of fixed nitrogen to wheat under greenhouse conditions in addition to colonizing the interior of a wide variety of other host plants (adapted from PubMed 18654632).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome5399
Plasmid pKP187229
Plasmid pKP91112

Publications

  1. "Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice."
    Fouts D.E., Tyler H.L., DeBoy R.T., Daugherty S., Ren Q., Badger J.H., Durkin A.S., Huot H., Shrivastava S., Kothari S., Dodson R.J., Mohamoud Y., Khouri H., Roesch L.F.W., Krogfelt K.A., Struve C., Triplett E.W., Methe B.A.
    PLoS Genet. 2008:E1000141-E1000141(2008) [PubMed] [Europe PMC] [Abstract]
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