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Overview

StatusReference proteome
Proteinsi19,108
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001646
Taxonomy28377 - Anolis carolinensis
StrainJBL SC #1
Last modifiedOctober 22, 2018
Genome assembly and annotationi GCA_000090745.1 from Ensembl

The green anole is a lizard belonging to the Polychrotidae family. This insectivorous and herbivorous animal is native to North America. Many people keep it as a pet because of its ability to change color which is unique for this type of lizard.

The green anole genome has 18 chromosomes containing 1.8 Gb with 18,000 protein-coding genes. The reference proteome is derived from the genome sequence published in 2011.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 12063
Chromosome 22035
Chromosome 31406
Chromosome 41445
Chromosome 51205
Chromosome 6903
Linkage group LGa24
Linkage group LGb65
Linkage group LGc63
Linkage group LGd5
Linkage group LGf107
Linkage group LGg3
Linkage group LGh3
Unplaced
9768
Mitochondrion13

Publications

  1. "The Genome Sequence of Anolis carolinensis (Green Anole Lizard)."
    Di Palma F., Alfoldi J., Heiman D., Young S., Grabherr M., Johnson J., Lander E.S., Lindblad-Toh K.
    Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
  2. "Adaptive evolution and functional redesign of core metabolic proteins in snakes."
    Castoe T.A., Jiang Z.J., Gu W., Wang Z.O., Pollock D.D.
    PLoS ONE 2008:E2201-E2201(2008) [PubMed] [Europe PMC] [Abstract]
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