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Overview

StatusReference proteome
Proteinsi28,544
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001554
StrainS238N-H82
Last modifiedOctober 26, 2018
Genome assembly and annotationi GCA_000003815.1 from ENA/EMBL

The Florida lancelet, Branchiostoma floridae, is a small marine filter feeder belonging to the subphylum Cephalochordata. As a basal member of the chordate phylum, it is of great interest to researchers investigating chordate evolution and phylogeny. It has several key anatomical features characteristic of the chordates including a dorsal nerve cord, pharyngeal slits and a post-anal tail.

Assembly v2.0 was released in 2008. It is around 520 Mb in size, contains approximately 21,900 protein-coding genes, and was derived from a single male specimen collected in Tampa Bay, Florida.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Partially assembled WGS sequence28531
Mitochondrion13
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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