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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 28,544
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001554
Taxonomy7739 - Branchiostoma floridae
StrainS238N-H82
Last modifiedNovember 5, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000003815.1 from ENA/EMBL full
BuscoC:90.7%[S:85.9%,D:4.8%],F:3.1%,M:6.2%,n:978
CompletenessStandard

The Florida lancelet, Branchiostoma floridae, is a small marine filter feeder belonging to the subphylum Cephalochordata. As a basal member of the chordate phylum, it is of great interest to researchers investigating chordate evolution and phylogeny. It has several key anatomical features characteristic of the chordates including a dorsal nerve cord, pharyngeal slits and a post-anal tail.

Assembly v2.0 was released in 2008. It is around 520 Mb in size, contains approximately 21,900 protein-coding genes, and was derived from a single male specimen collected in Tampa Bay, Florida.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Partially assembled WGS sequence28531
Mitochondrion13
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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