Proteomes - Synechocystis sp. (strain PCC 6803 / Kazusa)
Overview
| Status | Reference proteome |
| Proteinsi | 3,507 |
| Proteome IDi | UP000001425 |
| Taxonomy | 1111708 - Synechocystis sp. (strain PCC 6803 / Kazusa) |
| Strain | PCC 6803 / Kazusa |
| Last modified | February 26, 2018 |
| Genome assembly and annotationi | GCA_000009725.1 from ENA/EMBL |
| Pan proteomei | This proteome is part of the Synechocystis sp. (strain PCC 6803 / Kazusa) pan proteome (fasta) |
Model cyanobacterium that carries a complete set of genes for oxygenic photosynthesis, Synechocystis is also studied for its stress response and metabolism. The first glucose-tolerant strain was sequenced in 1996 (this strain Kazusa, SYNY3),while a second glucose tolerant strain, Synechocystis GT-S, and has been maintained as frozen glycerol stocks since the late 1980s. Careful comparison reveals that there is a single nucleotide change and two IS insertions between the Kazusa strain and the GT-S strain, with some changes to the sequence of the Kazusa strain also noticed. Although they have not been resubmitted strain GT-S also encodes the 4 plasmids sound in SYNY3 (adapted from PMID 21803841).
Publications
- "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. Tabata S.
DNA Res. 1996:109-136(1996) [PubMed] [Europe PMC] [Abstract] - "Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803."
Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., Tabata S.
DNA Res. 2003:221-228(2003) [PubMed] [Europe PMC] [Abstract]
