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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 2,945
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001409
Taxonomy196164 - Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
StrainDSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395
Last modifiedSeptember 28, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000011305.1 from ENA/EMBL

Bacteria from the genus Corynebacterium are Gram-positive, nonmotile rods which include both pathogenic and non-pathogenic species that can live in a large variety of habitats. In addition to being animal and human pathogens, they have been isolated from soil, plant material, waste water, and dairy products. Corynebacterium efficiens has been identified as a new glutamic-acid- producing species, isolated from soil and vegetables.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome2891
Plasmid pCE215
Plasmid pCE341

Publications

  1. "Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens."
    Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S., Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T.
    Genome Res. 2003:1572-1579(2003) [PubMed] [Europe PMC] [Abstract]
  2. "The entire sequence of plasmid maintained by Corynebacterium efficiens YS-314."
    Kawarabayasi Y., Yamazaki J., Hino Y., Kikuchi H.
    Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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