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Overview

Proteins4,276
Proteome IDiUP000001317
Taxonomy458817 - Shewanella halifaxensis (strain HAW-EB4)
StrainHAW-EB4
Last modifiedFebruary 27, 2018
Genome assembly and annotationi GCA_000019185.1 from ENA/EMBL
Pan proteomei This proteome is part of the Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) pan proteome (fasta)

Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments. They are capable of using a variety of compounds as electron acceptors, including oxygen, iron, manganese, uranium, nitrate, nitrite, fumarate, to name but a few. This ability makes Shewanella important for bioremediation of contaminated metals and radioactive wastes. The genus Shewanella comprises 36 recognized and hundreds of uncharacterized cultivable species.

Shewanella halifaxensis (strain HAW-EB4) is an obligately respiratory denitrifying and RDX-mineralizing bacterium isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). This psychrophilic, sodium cations-requiring and slightly halophilic bacterium is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) at 10 degrees Celsius. RDX is a member of a family of nitramine compounds which are used in the production of explosives. These chemicals are toxic and can be a major source of contamination of marine and freshwater sediments.

Componentsi

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Component nameGenome Accession(s)
Proteins
Chromosome4276

Publications

  1. "Complete sequence of Shewanella halifaxensis HAW-EB4."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Kim E., Zhao J.-S., Richardson P.
    Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases

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