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StatusReference proteome
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001261
Taxonomy246410 - Coccidioides immitis (strain RS)
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000149335.2 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Coccidioides immitis (strain RS) (Valley fever fungus) pan proteome (fasta)

Coccidioides immitis is a pathogenic ascomycete fungus endemic to desert regions of the southwestern United States, Mexico and South America. In humans, inhalation of soil spores can cause the life-threatening disease coccidioidomycosis, or valley fever. Unlike most other ascomycete fungi, pathogenic Coccidiodes species are primarily associated with mammals rather than plants. It is hoped that genomic analysis will uncover the evolution of these novel pathogenic traits and aid treatment of coccidioidomycosis.

The genome of C. immitis RS strain was released in 2009. It is 29 Mb in size and contains approximately 10,355 protein-coding genes.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Unassembled WGS sequence9712
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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