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Overview

StatusReference proteome
Proteinsi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> 10,657
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001197
Taxonomy515849 - Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383)
StrainS / ATCC MYA-4624 / DSM 980 / FGSC 10383
Last modifiedFebruary 8, 2019
Genome assemblyi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> from ENA/EMBL
Genome annotationi ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina) pan proteome (fasta)

The filamentous ascomycete fungus Podospora anserine (sordariomycete clade of the pezizomycotina) is easy to culture in the laboratory and can complete its sexual cycle within a week. Consequently it has been utilised as a fungal model in the study of eukaryotic (meiosis, ageing, prion and related protein-based inheritance) and fungal biology (hyphal interference, sexual reproduction and heterokaryon formation).

A complete assembly of the nuclear genome predicted to be 36 Mb in size included the mitochondrial genome, a single circular contig of about 95 kb. A combination of semi-automatic and manual annotation identified 10,545 protein coding genes.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome 12590
Chromosome 21601
Chromosome 31233
Chromosome 41142
Chromosome 51476
Chromosome 61294
Chromosome 71241
Mitochondrion80
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Main funding by: National Institutes of Health

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