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Overview

StatusReference proteome
Proteinsi17,895
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001194
Taxonomy486041 - Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686)
StrainS238N-H82 / ATCC MYA-4686
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000143565.1 from ENA/EMBL

The bicoloured deceiver Laccaria bicolor (Tricholomataceae) is a temperate ectomycorrhizal fungus with symbiotic relationships with a wide variety of trees including pines and black spruce. It is easy to establish with tree roots under laboratory conditions and is used commercially as a soil inoculate to improve plant growth. In 1990 L. bicolor was the first ectomycorrhizal fungus to have its genome sequenced.

The genome of L. bicolor is 65 Mb with an estimated 20, 000 protein coding genes. Gene analysis revealed a number of small secreted proteins which may be involved in establishing symbiosis and also genes encoding enzymes for degrading polysaccharides that enable it to survive in the soil without forming a symbiotic relationship.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Unassembled WGS sequence17895
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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