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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 3,711
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001120
Taxonomy326423 - Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / FZB42)
StrainDSM 23117 / BGSC 10A6 / FZB42
Last modifiedMarch 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000015785.2 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Bacillus subtilis (strain 168) pan proteome (fasta)
BuscoC:100%[S:100%,D:0%],F:0%,M:0%,n:450
CompletenessStandard

Bacillus amyloliquefaciens (strain FZB42) is a plant-associated bacterium, which stimulates plant growth and produces secondary metabolites that suppress soil-borne plant pathogens. Unlike the closely related B.subtilis 168, it lacks extended phage insertions. It possesses an unexpected potential to produce secondary metabolites, including the polyketides bacillaene and difficidin. More than 8.5 percent of the genome is devoted to the synthesis of antibiotics and siderophores through pathways that do not involve ribosomes.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome3711

Publications

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