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Overview

StatusReference proteome
Proteinsi2,045
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001013
Taxonomy186497 - Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
StrainATCC 43587 / DSM 3638 / JCM 8422 / Vc1
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000007305.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) pan proteome (fasta)

P.furiosus is found in the marine sand surrounding sulfurous volcanoes. Cells of this organism are motile cocci that have about 50 flagella at one end and are often found in pairs. They are anaerobic and are capable of growing at temperatures ranging from 70-103 Celsius and at a pH ranging from 5-9. The generation time is among the shortest found among the Archaea; only 37 minutes under optimal conditions. P.furiosus is remarkable because it is able to maintain chromosomal integrity at temperatures up to 103 degrees Celsius with very little accumulation of DNA breaks. It also is highly resistant to radiation and can withstand doses up to 1.5 kGy. For further information about the organism see Robb et al., PMID 11210495, Methods Enzymol. (2001) 330:134-57. This is the type strain.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome2045

Publications

  1. "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences."
    Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M., DiRuggiero J., Robb F.T.
    Genetics 1999:1299-1305(1999) [PubMed] [Europe PMC] [Abstract]
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