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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 1,682
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000774
Taxonomy203123 - Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
StrainATCC BAA-331 / PSU-1
Last modifiedMay 10, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000014385.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Oenococcus oeni (strain ATCC BAA-331 / PSU-1) pan proteome (fasta)
BuscoC:91.3%[S:91.3%,D:0%],F:1%,M:7.7%,n:402
CompletenessStandard

Oenococcus oeni (formerly called Leuconostoc oenos) is a lactic acid bacterium that occurs naturally in fruit mashes and related habitats. A facultative anaerobe, it is one of the most acid- and alcohol tolerant of the lactic acid bacteria. It is employed in wineries to carry out the malolactic conversion, an important secondary fermentation in the production of wine. This strain (BAA-331 / PSU-1), was originally isolated at Penn State University and is currently employed commercially to carry out the malolactic fermentation wines. Perhaps the most studied aspect of O. oeni is the ability to convert malate to lactate (the malolactic conversion). This involves uptake of malate, its decarboxylation to L-lactic acid and CO2, and subsequent export of end products. The malolactic conversion generates energy for the cell in the form of a proton motive force. Many researchers have examined the diversity of O. oeni strains within and around wineries; an outcome of this analysis is the general view that Oenococcus is a genetically homogenous genus (adapted from genome.jgi-psf.org/finished_microbes/oenoe/oenoe.home.html).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome1682
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Main funding by: National Institutes of Health

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