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Overview

Proteinsi4,309
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000745
Taxonomy585054 - Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
StrainATCC 35469 / DSM 13698 / CDC 0568-73
Last modifiedNovember 9, 2018
Genome assembly and annotationi GCA_000026225.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Escherichia coli (strain K12) pan proteome (fasta)

Escherichia fergusonii is the bacteria that is most closely related to E.coli. They are Gram-negative rods, oxidase negative, catalase positive, and usually motile, reduce nitrate to nitrite and ferment D-glucose. Strain ATCC 35469, the type strain, was isolated from the feces of a 1 year old boy, and may be commensal. It was previously known as CDC Enteric Group 10. The type strain is not virulent in a mouse model, however E.fergusonii has been isolated from human blood, urine and an arm wound. It has also been isolated from a number of other animals such as cow, pig, horse and turkey (partially adapted from PubMed 3968204).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome4256
Plasmid pEFER57
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Main funding by: National Institutes of Health

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