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Overview

StatusReference proteome
Proteins4,045
Proteome IDiUP000000645
Taxonomy232721 - Acidovorax sp. (strain JS42)
StrainJS42
Last modifiedFebruary 27, 2018
Genome assembly and annotationi GCA_000015545.1 from ENA/EMBL
Pan proteomei This proteome is part of the Acidovorax sp. (strain JS42) pan proteome (fasta)

Acidovorax sp. is an aerobic mesophillic Gram-negative bacterium phylogenetically associated with the beta subdivision of the Proteobacteria. It is formerly known as Pseudomonas sp. JS42. This nitroaromatic compound-degrader organism was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized. The genome sequence of this organism will provide information about the gene content of a free-living species with a catabolic capacity relevant to bioremediation of nitroaromatic-contaminated soils.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome3899
Plasmid pAOVO0184
Plasmid pAOVO0264

Publications

  1. "Complete sequence of plasmid 2 pAOVO02 of Acidovorax sp. JS42."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
  2. "Complete sequence of plasmid 1 pAOVO01 of Acidovorax sp. JS42."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
  3. "Complete sequence of chromosome 1 of Acidovorax sp. JS42."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Stahl D., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases

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