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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 2,109
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000585
Taxonomy170187 - Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
StrainATCC BAA-334 / TIGR4
Last modifiedMarch 21, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000006885.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Streptococcus pneumoniae (strain ATCC BAA-255 / R6) pan proteome (fasta)
BuscoC:98.8%[S:98.8%,D:0%],F:0.2%,M:1%,n:402
CompletenessStandard

Streptococci are non-motile, Gram-positive cocci with widely varying pathogenic potential that occur in pairs or chains. It is the most common bacterial cause of acute respiratory infection and otitis media and is estimated to result in over 3 millions deaths in children every year worldwide from pneumonia, bacteremia or meningitidis. Even more deaths occur among elderly people. Since 1990 the number of penicillin-resistant strains has increased and many strains are now resistant to commonly prescribed antibiotics such as penicillin, macrolides and fluoroquinones.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome2109
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Main funding by: National Institutes of Health

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