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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 5,045
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000551
Taxonomy264730 - Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Strain1448A / Race 6
Last modifiedJuly 25, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000012205.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) pan proteome (fasta)

Pseudomonas syringae pv. phaseolicola is the seed-borne causative agent of halo blight disease in Phaseolus vulgaris, the common bean. The combination of functional effector and resistance genes in races of Pseudomonas syringae pv. phaseolicola and cultivars of Phaseolus, respectively, determine the outcome of the plant-pathogen interaction. Classification of strains of Pseudomonas syringae pv. phaseolicola into races is based on their differential abilities to cause disease in diagnostic cultivars of Phaseolus. Pseudomonas syringae pv. phaseolicola (strain 1448A) belongs to the race 6 pathotype whose members are virulent on all Phaseolus vulgaris varieties examined.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome4893
Plasmid large97
Plasmid small60
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Main funding by: National Institutes of Health

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