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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 2,001
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000425
Taxonomy122586 - Neisseria meningitidis serogroup B (strain MC58)
StrainMC58
Last modifiedJune 29, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000008805.1 from ENA/EMBL full
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Neisseria meningitidis serogroup B (strain MC58) pan proteome (fasta)
BuscoC:98%[S:96.3%,D:1.7%],F:0.2%,M:1.7%,n:804
CompletenessStandard

Gram-negative meningococcal bacterium. Neisseria meningitidis colonizes the mucosal surface of the human nose and throat, usually as a commensal bacterium. Up to 15% of the human population are asymptomatic carriers. Sometimes the strains can invade the host, causing life-threatening invasive bacterial infections especially in young infants. They do so by gaining access to the blood and to the cerebrospinal fluid to cause meningitis and septicemia. Thus it is a major cause of morbidity and mortality. The pattern of serogroup B disease is typically hyperendemic or sporadic. Strains of this serogroup are a particular problem because they are a major cause of invasive disease in Europe and United States and there is currently no effective vaccine.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Chromosome2001
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Main funding by: National Institutes of Health

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