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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 5
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000402
Taxonomy649894 - Gill-associated virus (isolate Giant tiger prawn/Australia)
StrainIsolate Giant tiger prawn/Australia
Last modifiedAugust 9, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000872605.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Yellow head virus (YHV) pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Genome5

Publications

  1. "Gill-associated virus of Penaeus monodon prawns: an invertebrate virus with ORF1a and ORF1b genes related to arteri- and coronaviruses."
    Cowley J.A., Dimmock C.M., Spann K.M., Walker P.J.
    J. Gen. Virol. 2000:1473-1484(2000) [PubMed] [Europe PMC] [Abstract]
  2. "Yellow head virus from Thailand and gill-associated virus from Australia are closely related but distinct prawn viruses."
    Cowley J.A., Dimmock C.M., Wongteerasupaya C., Boonsaeng V., Panyim S., Walker P.J.
    Dis. Aquat. Organ. 1999:153-157(1999) [PubMed] [Europe PMC] [Abstract]
  3. "Gill-associated nidovirus of Penaeus monodon prawns transcribes 3'-coterminal subgenomic mRNAs that do not possess 5'-leader sequences."
    Cowley J.A., Dimmock C.M., Walker P.J.
    J. Gen. Virol. 2002:927-935(2002) [PubMed] [Europe PMC] [Abstract]
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