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Overview

StatusReference proteome
Proteinsi3,779
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000390
Taxonomy795797 - Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3)
StrainDSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3
Last modifiedOctober 26, 2018
Genome assembly and annotationi GCA_000196895.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) pan proteome (fasta)

Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) is non-motile cocci, extreme halophilic, Gram-variable archaeon isolated from shrimp jeotgal, a traditional Korean fermented seafood. This is the type strain (adapted from PMID: 20601480).

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome3034
Plasmid 1362
Plasmid 2331
Plasmid 341
Plasmid 441
Plasmid 524
Plasmid 68

Publications

  1. "Complete genome sequence of Halalkalicoccus jeotgali B3(T), an extremely halophilic archaeon."
    Roh S.W., Nam Y.D., Nam S.H., Choi S.H., Park H.S., Bae J.W.
    J. Bacteriol. 2010:4528-4529(2010) [PubMed] [Europe PMC] [Abstract]
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