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Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome%5Fredundancy">more...</a>)</p> 12
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a>. It consists of the characters 'UP' followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000000348
Taxonomy649603 - Rice ragged stunt virus (isolate Thailand)
StrainIsolate Thailand
Last modifiedFebruary 19, 2020
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000852965.1 from ENA/EMBL full
CompletenessStandard

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Component representationProteins
Genome12

Publications

  1. "The M(r) 43K major capsid protein of rice ragged stunt oryzavirus is a post-translationally processed product of a M(r) 67,348 polypeptide encoded by genome segment 8."
    Upadhyaya N.M., Zinkowsky E., Kositratana W., Waterhouse P.M.
    Arch. Virol. 141:1689-1701(1996) [PubMed] [Europe PMC] [Abstract]
  2. "Genome segment 5 of rice ragged stunt virus encodes a virion protein."
    Li Z., Upadhyaya N.M., Kositratana W., Gibbs A.J., Waterhouse P.M.
    J. Gen. Virol. 77:3155-3160(1996) [PubMed] [Europe PMC] [Abstract]
  3. "Rice ragged stunt oryzavirus genome segments S7 and S10 encode non-structural proteins of M(r) 68,025 (Pns7) and M(r) 32,364 (Pns10)."
    Upadhyaya N.M., Ramm K., Gellatly J.A., Li Z., Kositratana W., Waterhouse P.M.
    Arch. Virol. 142:1719-1726(1997) [PubMed] [Europe PMC] [Abstract]
  4. "Molecular analysis of rice ragged stunt oryzavirus segment 9 and sequence conservation among isolates from Thailand and India."
    Upadhyaya N.M., Yang M., Kositratana W., Ghosh A., Waterhouse P.M.
    Arch. Virol. 140:1945-1956(1995) [PubMed] [Europe PMC] [Abstract]
  5. "Rice ragged stunt oryzavirus genome segment S4 could encode an RNA dependent RNA polymerase and a second protein of unknown function."
    Upadhyaya N.M., Ramm K., Gellatly J.A., Li Z., Kositratana W., Waterhouse P.M.
    Arch. Virol. 143:1815-1822(1998) [PubMed] [Europe PMC] [Abstract]
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