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Proteomes - Acidiphilium cryptum (strain JF-5)

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Overview

StatusReference proteome
Proteins3,521
Proteome IDiUP000000245
Taxonomy349163 - Acidiphilium cryptum (strain JF-5)
StrainJF-5
Last modifiedFebruary 27, 2018
Genome assembly and annotationi GCA_000016725.1 from ENA/EMBL
Pan proteomei This proteome is part of the Acidiphilium cryptum (strain JF-5) pan proteome (fasta)

Acidiphilium cryptum (strain JF-5) is an acidophilic dissimilatory iron-reducing bacterium (DIRB) of the alpha subdivision of the Proteobacteria. This bacteria is detected in a variety of extreme low pH, radionuclide- and heavy-metal contaminated habitats where Fe(III) reduction is taking place, and may represent a significant proportion of metal-transforming organisms in these environments. Strain JF-5 serves as a model organism for facultative iron-respiring Alphaproteobacterium. It utilizes glucose as an electron donor with the concomitant reduction of soluble and solid-phase Fe(III). Major findings for this bacterium are a novel outer-membrane cytochrome c involved in iron respiration and a Cr(VI) reductase enzyme.

Componentsi

DownloadView all proteins
Component nameGenome Accession(s)
Proteins
Chromosome
CP000697
3053
Plasmid pACRY01
CP000689
160
Plasmid pACRY02
CP000690
169
Plasmid pACRY03
CP000691
77
Plasmid pACRY04
CP000692
32
Plasmid pACRY05
CP000693
28
Plasmid pACRY06
CP000694
9
Plasmid pACRY07
CP000695
5
Plasmid pACRY08
CP000696
5

Publications

  1. "Complete sequence of plasmid4 pACRY04 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  2. "Complete sequence of chromosome of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  3. "Complete sequence of plasmid5 pACRY05 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  4. "Complete sequence of plasmid8 pACRY08 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  5. "Complete sequence of plasmid6 pACRY06 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  6. "Complete sequence of plasmid1 pACRY01 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  7. "Complete sequence of plasmid3 pACRY03 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  8. "Complete sequence of plasmid2 pACRY02 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
  9. "Complete sequence of plasmid7 pACRY07 of Acidiphilium cryptum JF-5."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Han C., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Kim E., Magnuson T., Richardson P.
    Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases

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