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yeast1.txt

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        UniProt - Swiss-Prot Protein Knowledgebase
        SIB Swiss Institute of Bioinformatics; Geneva, Switzerland
        European Bioinformatics Institute (EBI); Hinxton, United Kingdom
        Protein Information Resource (PIR); Washington DC, USA
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Description: Yeast (Saccharomyces cerevisiae) chromosome 1: entries and
             gene names
Name:        yeast1.txt
Release:     2021_03 of 02-Jun-2021

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======================================
Yeast chromosome 1 open reading frames
======================================

Reference for complete sequence:

RX   PubMed=7731988
RA   Bussey H., Kaback D.B., Zhong W.-W., Vo D.H., Clark M.W., Fortin N.,
RA   Hall J., Ouellette B.F.F., Keng T., Barton A.B., Su Y., Davies C.J.,
RA   Storms R.K.
RT   The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.
RL   Proc. Natl. Acad. Sci. U.S.A. 92:3809-3813(1995)
RX   PubMed=24374639
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry
RA   J.M.
RT   The reference genome sequence of Saccharomyces cerevisiae: Then and
RT   now.
RL   G3 (Bethesda) 4:389-398(2014)


Size of the chromosome: 230 Kb.
Total number of ORFs currently in Swiss-Prot: 94

=====================
ORF code nomenclature
=====================

YX[L|R]ddd[w|c]

Y      =  Yeast
X      =  Letter representing the chromosome
L | R  =  'L' is for Left arm; 'R' is for Right arm
ddd    =  ORF number on the left or right arm
c | w  =  'c' is for complementary strand; 'w' is for Watson strand


________________________ ___________ __________ ____ ____________________________________________________________ _______________________________________ ______________________________
Ordered locus name       Swiss-Prot             Size Gene name and synonyms                                       ORF code synonyms                       Evidence
                         entry name  AC         a.a.
________________________ ___________ __________ ____ ____________________________________________________________ _______________________________________ ______________________________
YAL069W                  YA069_YEAST     O13588  104                                                                                                      Uncertain                   
YAL068W-A                YAG8_YEAST      Q8TGK7   84                                                                                                      Uncertain                   
YAL068C                  PAU8_YEAST      P0CE92  120 PAU8                                                                                                 Inferred from homology      
YAL067W-A                YA067_YEAST     Q8TGK6   75                                                                                                      Evidence at transcript level
YAL067C                  SEO1_YEAST      P39709  593 SEO1                                                                                                 Evidence at protein level   
YAL066W                  YAG6_YEAST      P39710  102                                                                                                      Uncertain                   
YAL065C                  YA065_YEAST     O13511  128                                                                                                      Evidence at transcript level
YAL064W-B                YA64B_YEAST     O13512  126                                                                                                      Evidence at protein level   
YAL064W                  YAG4_YEAST      P39711   94                                                                                                      Predicted                   
YAL064C-A                TDA8_YEAST      Q6B2U8  126 TDA8                                                                                                 Inferred from homology      
YAL063C-A                YA063_YEAST     Q3E791   96                                                                                                      Evidence at protein level   
YAL063C                  FLO9_YEAST      P39712 1322 FLO9                                                                                                 Inferred from homology      
YAL062W                  DHE5_YEAST      P39708  457 GDH3                                                         FUN51                                   Inferred from homology      
YAL061W                  BDH2_YEAST      P39713  417 BDH2                                                         FUN50                                   Evidence at protein level   
YAL060W                  BDH1_YEAST      P39714  382 BDH1; BDH                                                    FUN49                                   Evidence at protein level   
YAL059W                  ECM1_YEAST      P39715  212 ECM1; SIM1                                                                                           Evidence at protein level   
YAL059C-A                YA059_YEAST A0A023PYD0  140                                                                                                      Uncertain                   
YAL058W                  CALX_YEAST      P27825  502 CNE1                                                         FUN48                                   Evidence at protein level   
YAL056W                  GPB2_YEAST      P39717  880 GPB2; KRH1                                                                                           Evidence at protein level   
YAL056C-A                YA056_YEAST     O13513  116                                                              YAL058C-A                               Uncertain                   
YAL055W                  PEX22_YEAST     P39718  180 PEX22                                                                                                Evidence at protein level   
YAL054C                  ACS1_YEAST      Q01574  713 ACS1                                                         FUN44                                   Evidence at protein level   
YAL053W                  FLC2_YEAST      P39719  783 FLC2                                                                                                 Evidence at protein level   
YAL051W                  OAF1_YEAST      P39720 1047 OAF1; YAF1                                                   FUN43                                   Evidence at protein level   
YAL049C                  AIM2_YEAST      P39721  246 AIM2                                                                                                 Evidence at protein level   
YAL048C                  GEM1_YEAST      P39722  662 GEM1                                                                                                 Evidence at protein level   
YAL047W-A                YA047_YEAST A0A023PZE2  109                                                                                                      Uncertain                   
YAL047C                  SPC72_YEAST     P39723  622 SPC72; LDB4; SPI6                                            FUN42                                   Evidence at protein level   
YAL046C                  BOL3_YEAST      P39724  118 BOL3; AIM1                                                                                           Evidence at protein level   
YAL045C                  YAE5_YEAST      P39725  102                                                                                                      Uncertain                   
YAL044W-A                BOL1_YEAST      Q3E793  110 BOL1                                                                                                 Evidence at protein level   
YAL044C                  GCSH_YEAST      P39726  170 GCV3                                                         FUN40                                   Evidence at protein level   
YAL043C                  PTA1_YEAST      Q01329  785 PTA1                                                         FUN39                                   Evidence at protein level   
YAL042W                  ERV46_YEAST     P39727  415 ERV46                                                        FUN9                                    Evidence at protein level   
YAL042C-A                YA042_YEAST     O13514  125                                                              YAL043C-A                               Uncertain                   
YAL041W                  CDC24_YEAST     P11433  854 CDC24; CLS4                                                                                          Evidence at protein level   
YAL040C                  CG13_YEAST      P13365  580 CLN3; DAF1; WHI1                                             FUN10                                   Evidence at protein level   
YAL039C                  CCHL_YEAST      P06182  269 CYC3                                                                                                 Evidence at protein level   
YAL038W                  KPYK1_YEAST     P00549  500 CDC19; PYK1                                                                                          Evidence at protein level   
YAL037W                  YAD7_YEAST      P39728  267                                                                                                      Predicted                   
YAL037C-B                YA37B_YEAST     Q8TGR8  324                                                              YAL038C-A                               Uncertain                   
YAL037C-A                YA037_YEAST     Q3E741   30                                                                                                      Predicted                   
YAL036C                  RBG1_YEAST      P39729  369 RBG1; FUN11                                                                                          Evidence at protein level   
YAL035W                  IF2P_YEAST      P39730 1002 FUN12                                                                                                Evidence at protein level   
YAL034W-A                MTW1_YEAST      P39731  289 MTW1; DSN3; NSL2                                             YAL034AW                                Evidence at protein level   
YAL034C-B                YA034_YEAST     O13515  117                                                              YAL035C-A                               Uncertain                   
YAL034C                  FUN19_YEAST     P28003  413 FUN19                                                                                                Evidence at protein level   
YAL033W                  POP5_YEAST      P28005  173 POP5                                                         FUN53                                   Evidence at protein level   
YAL032C                  PRP45_YEAST     P28004  379 PRP45; FUN20                                                                                         Evidence at protein level   
YAL031W-A                YA031_YEAST A0A023PZ94  102                                                                                                      Uncertain                   
YAL031C                  GIP4_YEAST      P39732  760 GIP4; FUN21                                                                                          Evidence at protein level   
YAL030W                  SNC1_YEAST      P31109  117 SNC1                                                                                                 Evidence at protein level   
YAL029C                  MYO4_YEAST      P32492 1471 MYO4; SHE1                                                   FUN22                                   Evidence at protein level   
YAL028W                  HPH2_YEAST      P39734  528 FRT2; HPH2                                                                                           Evidence at protein level   
YAL027W                  SAW1_YEAST      P39735  261 SAW1                                                                                                 Evidence at protein level   
YAL026C-A                YA026_YEAST A0A023PXH4  145                                                                                                      Uncertain                   
YAL026C                  ATC3_YEAST      P39524 1355 DRS2                                                         FUN38                                   Evidence at protein level   
YAL025C                  MAK16_YEAST     P10962  306 MAK16                                                                                                Evidence at protein level   
YAL024C                  LTE1_YEAST      P07866 1435 LTE1; EIS4; MSI2                                                                                     Evidence at protein level   
YAL023C                  PMT2_YEAST      P31382  759 PMT2; FUN25                                                                                          Evidence at protein level   
YAL022C                  FUN26_YEAST     P31381  517 FUN26                                                                                                Evidence at protein level   
YAL021C                  CCR4_YEAST      P31384  837 CCR4                                                         FUN27                                   Evidence at protein level   
YAL020C                  ATS1_YEAST      P31386  333 ATS1; KTI13                                                  FUN28; YAL006                           Evidence at protein level   
YAL019W-A                YA19A_YEAST A0A023PXA5  189                                                                                                      Uncertain                   
YAL019W                  FUN30_YEAST     P31380 1131 FUN30                                                        YAL001                                  Evidence at protein level   
YAL018C                  LDS1_YEAST      P31379  325 LDS1                                                         YAL003                                  Evidence at protein level   
YAL017W                  PSK1_YEAST      P31374 1356 PSK1                                                         FUN31; YAL002                           Evidence at protein level   
YAL016W                  2AAA_YEAST      P31383  635 TPD3                                                         FUN32                                   Evidence at protein level   
YAL016C-B                YA016_YEAST     P0C1V3   61                                                                                                      Uncertain                   
YAL016C-A                YA16A_YEAST A0A023PYC6  104                                                                                                      Uncertain                   
YAL015C                  NTH1_YEAST      P31378  399 NTG1; OGG2; SCR1                                             FUN33                                   Evidence at protein level   
YAL014C                  STX8_YEAST      P31377  255 SYN8; UIP2                                                   FUN34                                   Evidence at protein level   
YAL013W                  DEP1_YEAST      P31385  405 DEP1; FUN54                                                                                          Evidence at protein level   
YAL012W                  CYS3_YEAST      P31373  394 CYS3; CYI1; STR1                                             FUN35                                   Evidence at protein level   
YAL011W                  SWC3_YEAST      P31376  625 SWC3; FUN36; SWC1                                                                                    Evidence at protein level   
YAL010C                  MDM10_YEAST     P18409  493 MDM10                                                        FUN37                                   Evidence at protein level   
YAL009W                  SPO7_YEAST      P18410  259 SPO7                                                                                                 Evidence at protein level   
YAL008W                  FUN14_YEAST     P18411  198 FUN14                                                                                                Evidence at protein level   
YAL007C                  ERP2_YEAST      P39704  215 ERP2                                                         FUN54                                   Evidence at protein level   
YAL005C                  HSP71_YEAST     P10591  642 SSA1                                                                                                 Evidence at protein level   
YAL004W                  YAA4_YEAST      P39703  215                                                                                                      Uncertain                   
YAL003W                  EF1B_YEAST      P32471  206 EFB1; TEF5                                                                                           Evidence at protein level   
YAL002W                  VPS8_YEAST      P39702 1274 VPS8; VPT8                                                   FUN15                                   Evidence at protein level   
YAL001C                  TFC3_YEAST      P34111 1160 TFC3; TSV115                                                 FUN24                                   Evidence at protein level   
YAR002C-A                ERP1_YEAST      Q05359  219 ERP1                                                         YAR002A                                 Evidence at protein level   
YAR002W                  NUP60_YEAST     P39705  539 NUP60; FUN17                                                                                         Evidence at protein level   
YAR003W                  SWD1_YEAST      P39706  426 SWD1; CPS50; SAF49                                           FUN16                                   Evidence at protein level   
YAR007C                  RFA1_YEAST      P22336  621 RFA1; BUF2; RPA1                                             FUN3                                    Evidence at protein level   
YAR008W                  SEN34_YEAST     P39707  275 SEN34                                                        FUN4                                    Evidence at protein level   
YAR009C                  YA11B_YEAST     O13527 1196 TY1B-A; YARCTy1-1 POL                                                                                Inferred from homology      
YAR010C                  YA11A_YEAST     P0CX57  440 TY1A-A; YARCTy1-1 GAG                                        P9659.6d                                Evidence at transcript level
YAR014C                  BUD14_YEAST     P27637  709 BUD14                                                        FUN2                                    Evidence at protein level   
YAR015W                  PUR7_YEAST      P27616  306 ADE1                                                                                                 Evidence at protein level   
YAR018C                  KIN3_YEAST      P22209  435 KIN3; NPK1                                                   FUN52                                   Inferred from homology      
YAR019C                  CDC15_YEAST     P27636  974 CDC15; LYT1                                                                                          Evidence at protein level   
YAR019W-A                YA019_YEAST A0A023PXB0  110                                                                                                      Uncertain                   
YAR020C                  PAU7_YEAST      P39545   55 PAU7                                                                                                 Inferred from homology      
YAR023C                  YAJ3_YEAST      D6VPM8  179                                                                                                      Uncertain                   
YAR027W                  UIP3_YEAST      P39547  235 UIP3                                                         FUN55                                   Evidence at protein level   
YAR028W                  YAJ8_YEAST      P39548  234                                                              FUN56                                   Evidence at protein level   
YAR029W                  YAJ9_YEAST      P39549   74                                                              FUN57                                   Inferred from homology      
YAR030C                  YAK0_YEAST      P39550  113                                                                                                      Uncertain                   
YAR031W                  PRM9_YEAST      P39551  298 PRM9                                                         FUN58                                   Evidence at protein level   
YAR033W                  MST28_YEAST     P39552  234 MST28                                                        FUN59                                   Evidence at protein level   
YAR035C-A                YA035_YEAST     Q8TGV0   26                                                                                                      Predicted                   
YAR035W                  CACM_YEAST      P80235  687 YAT1                                                                                                 Evidence at protein level   
YAR042W                  OSH1_YEAST      P35845 1188 SWH1; OSH1                                                   YAR044W                                 Evidence at protein level   
YAR047C                  YAL7_YEAST      P39557  106                                                                                                      Uncertain                   
YAR050W                  FLO1_YEAST      P32768 1537 FLO1; FLO2; FLO4; FLO8                                                                               Evidence at protein level   
YAR053W                  YAM3_YEAST      P39559   98                                                                                                      Uncertain                   
YAR060C                  YAN0_YEAST      P0CX88  111                                                                                                      Uncertain                   
YAR061W                  YAN1_YEAST      P0CX90   67                                                                                                      Uncertain                   
YAR062W                  YAN2_YEAST      P0CI66  198                                                                                                      Uncertain                   
YAR064W                  YAN4_YEAST      P39563   99                                                                                                      Evidence at protein level   
YAR066W                  YA066_YEAST     P0CX18  203                                                                                                      Evidence at protein level   
YAR068W                  YAN8_YEAST      P39564  161                                                                                                      Predicted                   
YAR069C                  YAN9_YEAST      P0CX92   97                                                                                                      Uncertain                   
YAR070C                  YAO0_YEAST      P39566   99                                                                                                      Uncertain                   
YAR071W                  PPAB_YEAST      P35842  467 PHO11                                                                                                Evidence at protein level   
YAR073W                  IMDH1_YEAST     P39567  403 IMD1                                                         FUN63                                   Uncertain                   
YAR075W                  YA075_YEAST     O42831  157                                                                                                      Uncertain                   

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