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humchry.txt

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        UniProt - Swiss-Prot Protein Knowledgebase
        SIB Swiss Institute of Bioinformatics; Geneva, Switzerland
        European Bioinformatics Institute (EBI); Hinxton, United Kingdom
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Description: Human chromosome Y: entries, gene names and
             cross-references to MIM
Name:        humchry.txt
Release:     2018_06 of 20-Jun-2018

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This documents lists all the human protein sequence entries whose genes
are known to be encoded on chromosome Y in this release of UniProtKB/Swiss-Prot.

Number of UniProtKB/Swiss-Prot entries encoded on chromosome Y: 47

Reference for the chromosome sequence:
Nature 423:825-837(2003).
[Pubmed: 12815422] [Article from publisher]

For more information on chromosome Y see:

Ensembl : http://www.ensembl.org/Homo_sapiens/mapview?chr=Y
NCBI    : https://www.ncbi.nlm.nih.gov/mapview/maps.cgi?taxid=9606&chr=Y
OMIM    : https://www.ncbi.nlm.nih.gov/Omim/getmap.cgi?chromosome=Y
DOE     : http://www.ornl.gov/sci/techresources/Human_Genome/launchpad/chromY.shtml


_______    _______________ ______________________ ______ ______________________
Gene       Chromosomal     Swiss-Prot             MIM    Description
name       position        AC     Entry name      code
_______    _______________ ______________________ ______ ______________________
AMELY      Yp11.2          Q99218     AMELY_HUMAN 410000 Amelogenin, Y isoform precursor [AMGL] [AMGY]
BCORP1     Yq11.222        Q8N888     BCOR2_HUMAN        Putative BCoR-like protein 2 (BCL-6 corepressor pseudogene 1) (BCL-6 corepressor-like protein 2) [BCORL2]
BPY2       Yq11            O14599     VCY2_HUMAN  400013 Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [BPY2A] [VCY2] [VCY2A]
BPY2B      Yq11.223        O14599     VCY2_HUMAN         Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [VCY2B]
BPY2C      Yq11.223        O14599     VCY2_HUMAN         Testis-specific basic protein Y 2 (Basic charge, Y-linked 2) (Variably charged protein Y 2) [VCY2C]
CDY1       Yq11.23         Q9Y6F8     CDY1_HUMAN  400016 Testis-specific chromodomain protein Y 1 (EC 2.3.1.48) [CDY1A]
CDY1B      Yq11.23         Q9Y6F8     CDY1_HUMAN         Testis-specific chromodomain protein Y 1 (EC 2.3.1.48)
CDY2A      Yq11.221        Q9Y6F7     CDY2_HUMAN  400018 Testis-specific chromodomain protein Y 2 (EC 2.3.1.48) [CDY2]
CDY2B      Yq11.221        Q9Y6F7     CDY2_HUMAN         Testis-specific chromodomain protein Y 2 (EC 2.3.1.48)
DAZ1       Yq11.23         Q9NQZ3     DAZ1_HUMAN  400003 Deleted in azoospermia protein 1 [DAZ] [SPGY]
DAZ2       Yq11.23         Q13117     DAZ2_HUMAN  400026 Deleted in azoospermia protein 2
DAZ3       Yq11.23         Q9NR90     DAZ3_HUMAN  400027 Deleted in azoospermia protein 3
DAZ4       Yq11.23         Q86SG3     DAZ4_HUMAN  400003 Deleted in azoospermia protein 4
DDX3Y      Yq11            O15523     DDX3Y_HUMAN 400010 ATP-dependent RNA helicase DDX3Y (EC 3.6.4.13) (DEAD box protein 3, Y-chromosomal) [DBY]
EIF1AY     Yq11.222        O14602     IF1AY_HUMAN 400014 Eukaryotic translation initiation factor 1A, Y-chromosomal (eIF-1A Y isoform) (Eukaryotic translation initiation factor 4C) (eIF-4C)
HSFY1      Yq11.221        Q96LI6     HSFY1_HUMAN 400029 Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) [HSF2L] [HSFY]
HSFY2      Yq11.221        Q96LI6     HSFY1_HUMAN        Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) [HSF2L] [HSFY]
KDM5D      Yq11            Q9BY66     KDM5D_HUMAN 426000 Lysine-specific demethylase 5D (EC 1.14.11.-) (Histocompatibility Y antigen) (H-Y) (Histone demethylase JARID1D) (Jumonji/ARID domain-containing protein 1D) (Protein SmcY) [HY] [HYA] [JARID1D] [KIAA0234] [SMCY]
NLGN4Y     Yq11.221        Q8NFZ3     NLGNY_HUMAN 400028 Neuroligin-4, Y-linked precursor (Neuroligin Y) [KIAA0951]
PCDH11Y    Yp11.2          Q9BZA8     PC11Y_HUMAN 400022 Protocadherin-11 Y-linked precursor (Protocadherin-11) (Protocadherin on the Y chromosome) (PCDH-Y) (Protocadherin prostate cancer) (Protocadherin-PC) (Protocadherin-22) [PCDH11] [PCDH22] [PCDHY]
PRKY       Yp11.2          O43930     PRKY_HUMAN  400008 Putative serine/threonine-protein kinase PRKY (EC 2.7.11.1)
PRORY      Yq11.223        Q9H606     PRORY_HUMAN        Proline-rich protein, Y-linked [CYorf17]
PRY        Yq11.223        O14603     PRY_HUMAN   400041 PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein) [PRY1] [PTPN13LY]
PRY2       Yq11.223        O14603     PRY_HUMAN   400019 PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein) [PTPN13LY2]
PRYP3      Yq11.223        O14603     PRY_HUMAN          PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein)
PRYP4      Yq11.23         O14603     PRY_HUMAN          PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein)
RBMY1A1    Yq11.23         P0DJD3     RBY1A_HUMAN 400006 RNA-binding motif protein, Y chromosome, family 1 member A1 (RNA-binding motif protein 1) (RNA-binding motif protein 2) (Y chromosome RNA recognition motif 1) (hRBMY) [RBM1] [RBM2] [YRRM1] [YRRM2]
RBMY1B     Yq11.223        A6NDE4     RBY1B_HUMAN        RNA-binding motif protein, Y chromosome, family 1 member B
RBMY1C     Yq11.23         P0DJD4     RBY1C_HUMAN 400006 RNA-binding motif protein, Y chromosome, family 1 member C
RBMY1D     Yq11.223        P0C7P1     RBY1D_HUMAN        RNA-binding motif protein, Y chromosome, family 1 member D
RBMY1E     Yq11.223        A6NEQ0     RBY1E_HUMAN        RNA-binding motif protein, Y chromosome, family 1 member E
RBMY1F     Yq11.223        Q15415     RBY1F_HUMAN 400006 RNA-binding motif protein, Y chromosome, family 1 member F/J (Y chromosome RNA recognition motif 2) [YRRM2]
RBMY1J     Yq11.223        Q15415     RBY1F_HUMAN        RNA-binding motif protein, Y chromosome, family 1 member F/J (Y chromosome RNA recognition motif 2)
RPS4Y1     Yp11.3          P22090     RS4Y1_HUMAN 470000 40S ribosomal protein S4, Y isoform 1 (Small ribosomal subunit protein eS4) [RPS4Y] [PRO2646]
RPS4Y2     Yq11.223        Q8TD47     RS4Y2_HUMAN 400030 40S ribosomal protein S4, Y isoform 2 (Small ribosomal subunit protein eS4) [RPS4Y2P]
SLC9B1P1   Yq11.1          A6NJY1     SL9P1_HUMAN        Putative SLC9B1-like protein SLC9B1P1 (Solute carrier family 9 subfamily B member 1 pseudogene 1)
SRY        Yp11.3          Q05066     SRY_HUMAN   480000 Sex-determining region Y protein (Testis-determining factor) [TDF]
TBL1Y      Yp11.2          Q9BQ87     TBL1Y_HUMAN 400033 F-box-like/WD repeat-containing protein TBL1Y (Transducin beta-like protein 1Y) (Transducin-beta-like protein 1, Y-linked) [TBL1]
TGIF2LY    Yp11.2          Q8IUE0     TF2LY_HUMAN 400025 Homeobox protein TGIF2LY (TGF-beta-induced transcription factor 2-like protein) (TGFB-induced factor 2-like protein, Y-linked) (TGIF-like on the Y) [TGIFLY]
TMSB4Y     Yq11.221        O14604     TYB4Y_HUMAN 400017 Thymosin beta-4, Y-chromosomal [TB4Y]
TSPY1      Yp11.2          Q01534     TSPY1_HUMAN 480100 Testis-specific Y-encoded protein 1 (Cancer/testis antigen 78) (CT78) [TSPY]
TSPY10     Yp11.2          P0CW01     TSPYA_HUMAN        Testis-specific Y-encoded protein 10
TSPY2      Yp11.2          A6NKD2     TSPY2_HUMAN        Testis-specific Y-encoded protein 2 (Testis-specific Y-encoded protein Q1) [TSPYQ1]
TSPY3      Yp11.2          P0CV98     TSPY3_HUMAN        Testis-specific Y-encoded protein 3
TSPY4      Yp11.2          P0CV99     TSPY4_HUMAN        Testis-specific Y-encoded protein 4
TSPY8      Yp11.2          P0CW00     TSPY8_HUMAN        Testis-specific Y-encoded protein 8
TTTY10     Yp11.2          Q9BZA0     TTY10_HUMAN        Putative transcript Y 10 protein [TTY10]
TTTY12     Yp11.2          Q9BZ98     TTY12_HUMAN        Putative transcript Y 12 protein [TTY12]
TTTY13     Yq11.223        Q9BZ97     TTY13_HUMAN        Putative transcript Y 13 protein [TTY13]
TXLNGY     Yq11.222        Q9BZA5     TXNG2_HUMAN 400032 Putative gamma-taxilin 2 (Gamma-taxilin 2 pseudogene) (Taxilin gamma pseudogene, Y-linked) [CYorf15A] [CYorf15B] [TXLNG2P]
USP9Y      Yq11.2          O00507     USP9Y_HUMAN 400005 Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC 3.4.19.12) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y-linked) (Ubiquitin thioesterase FAF-Y) (Ubiquitin-specific protease 9, Y chromosome) (Ubiquitin-specific-processing protease FAF-Y) [DFFRY]
UTY        Yq11            O14607     UTY_HUMAN   400009 Histone demethylase UTY (EC 1.14.11.-) (Ubiquitously-transcribed TPR protein on the Y chromosome) (Ubiquitously-transcribed Y chromosome tetratricopeptide repeat protein) [KDM6C]
VCY        Yq11.221        O14598     VCY1_HUMAN  400012 Testis-specific basic protein Y 1 (Basic charge, Y-linked 1) (Variably charged protein Y) [BPY1] [VCY1A]
VCY1B      Yq11.221        O14598     VCY1_HUMAN         Testis-specific basic protein Y 1 (Basic charge, Y-linked 1) (Variably charged protein Y) [BPY1B]
XKRY       Yq11.221        O14609     XKRY_HUMAN  400015 Testis-specific XK-related protein, Y-linked [XKRY1]
XKRY2      Yq11.221        A2RUG3     XKRY2_HUMAN        Testis-specific XK-related protein, Y-linked 2
ZFY        Yp11.3          P08048     ZFY_HUMAN   490000 Zinc finger Y-chromosomal protein

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