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Protein
Submitted name:

HCG15924, isoform CRA_a

Gene

SNRPN

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

RibonucleoproteinImported

Keywords - Ligandi

Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
HCG15924, isoform CRA_aImported
Submitted name:
Small nuclear ribonucleoprotein polypeptide N isoform AImported
Gene namesi
Name:SNRPNImported
ORF Names:hCG_15924Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Virion

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000306223.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 82SmInterPro annotationAdd BLAST76

Phylogenomic databases

eggNOGiKOG3168. Eukaryota.
COG1958. LUCA.
KOiK11100.

Family and domain databases

InterProiIPR010920. LSM_dom.
IPR001163. LSM_dom_euk/arc.
IPR017131. snRNP-assoc_SmB/SmN.
[Graphical view]
PfamiPF01423. LSM. 1 hit.
[Graphical view]
PIRSFiPIRSF037187. snRNP_SmB/SmN. 1 hit.
SMARTiSM00651. Sm. 1 hit.
[Graphical view]
SUPFAMiSSF50182. SSF50182. 1 hit.

Sequencei

Sequence statusi: Fragment.

X5DP00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVGKSSKML QHIDYRMRCI LQDGRIFIGT FKAFDKHMNL ILCDCDEFRK
60 70 80 90 100
IKPKNAKQPE REEKRVLGLV LLRGENLVSM TVEGPPPKDT GIARVPLAGA
110 120 130 140 150
AGGPGVGRAA GRGVPAGVPI PQAPAGLAGP VRGVGGPSQQ VMTPQGRGTV
160 170 180 190 200
AAAAVAATAS IAGAPTQYPP GRGTPPPPVG RATPPPGIMA PPPGMRPPMG
210 220 230 240
PPIGLPPARG TPIGMPPPGM RPPPPGIRGP PPPGMRPPRP
Length:240
Mass (Da):24,614
Last modified:June 11, 2014 - v1
Checksum:i9A176D043561474C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei240Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ534946 mRNA. Translation: AHW56586.1.
CH471151 Genomic DNA. Translation: EAW57613.1.
CH471151 Genomic DNA. Translation: EAW57614.1.
CH471151 Genomic DNA. Translation: EAW57615.1.
CH471151 Genomic DNA. Translation: EAW57616.1.
CH471151 Genomic DNA. Translation: EAW57617.1.
CH471151 Genomic DNA. Translation: EAW57618.1.
CH471151 Genomic DNA. Translation: EAW57619.1.
CH471151 Genomic DNA. Translation: EAW57620.1.
CH471151 Genomic DNA. Translation: EAW57621.1.
CH471151 Genomic DNA. Translation: EAW57622.1.
CH471151 Genomic DNA. Translation: EAW57623.1.
RefSeqiNP_003088.1. NM_003097.4.
NP_073716.1. NM_022805.3.
NP_073717.1. NM_022806.3.
NP_073718.1. NM_022807.3.
NP_073719.1. NM_022808.3.
UniGeneiHs.555970.
Hs.564847.
Hs.578619.
Hs.585703.
Hs.621316.
Hs.632166.
Hs.728856.
Hs.731866.
Hs.733072.
Hs.737651.

Genome annotation databases

GeneIDi6638.
KEGGihsa:6638.
UCSCiuc001ywp.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KJ534946 mRNA. Translation: AHW56586.1.
CH471151 Genomic DNA. Translation: EAW57613.1.
CH471151 Genomic DNA. Translation: EAW57614.1.
CH471151 Genomic DNA. Translation: EAW57615.1.
CH471151 Genomic DNA. Translation: EAW57616.1.
CH471151 Genomic DNA. Translation: EAW57617.1.
CH471151 Genomic DNA. Translation: EAW57618.1.
CH471151 Genomic DNA. Translation: EAW57619.1.
CH471151 Genomic DNA. Translation: EAW57620.1.
CH471151 Genomic DNA. Translation: EAW57621.1.
CH471151 Genomic DNA. Translation: EAW57622.1.
CH471151 Genomic DNA. Translation: EAW57623.1.
RefSeqiNP_003088.1. NM_003097.4.
NP_073716.1. NM_022805.3.
NP_073717.1. NM_022806.3.
NP_073718.1. NM_022807.3.
NP_073719.1. NM_022808.3.
UniGeneiHs.555970.
Hs.564847.
Hs.578619.
Hs.585703.
Hs.621316.
Hs.632166.
Hs.728856.
Hs.731866.
Hs.733072.
Hs.737651.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000306223.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6638.
KEGGihsa:6638.
UCSCiuc001ywp.1. human.

Organism-specific databases

CTDi6638.

Phylogenomic databases

eggNOGiKOG3168. Eukaryota.
COG1958. LUCA.
KOiK11100.

Miscellaneous databases

ChiTaRSiSNRPN. human.
GenomeRNAii6638.

Family and domain databases

InterProiIPR010920. LSM_dom.
IPR001163. LSM_dom_euk/arc.
IPR017131. snRNP-assoc_SmB/SmN.
[Graphical view]
PfamiPF01423. LSM. 1 hit.
[Graphical view]
PIRSFiPIRSF037187. snRNP_SmB/SmN. 1 hit.
SMARTiSM00651. Sm. 1 hit.
[Graphical view]
SUPFAMiSSF50182. SSF50182. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiX5DP00_HUMAN
AccessioniPrimary (citable) accession number: X5DP00
Entry historyi
Integrated into UniProtKB/TrEMBL: June 11, 2014
Last sequence update: June 11, 2014
Last modified: November 2, 2016
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.