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Protein

DNA-directed RNA polymerase subunit

Gene

KUCA_T00000988001

Organism
Kuraishia capsulata CBS 1993
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotation, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunitUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
ORF Names:KUCA_T00000988001Imported
OrganismiKuraishia capsulata CBS 1993Imported
Taxonomic identifieri1382522 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetales incertae sedisKuraishia
Proteomesi
  • UP000019384 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini234 – 537RPOLA_NInterPro annotationAdd BLAST304

Sequence similaritiesi

Belongs to the RNA polymerase beta' chain family.UniRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR000722. RNA_pol_asu.
IPR000684. RNA_pol_II_repeat_euk.
IPR006592. RNA_pol_N.
IPR007080. RNA_pol_Rpb1_1.
IPR007066. RNA_pol_Rpb1_3.
IPR007083. RNA_pol_Rpb1_4.
IPR007081. RNA_pol_Rpb1_5.
IPR007075. RNA_pol_Rpb1_6.
IPR007073. RNA_pol_Rpb1_7.
PfamiView protein in Pfam
PF04997. RNA_pol_Rpb1_1. 1 hit.
PF00623. RNA_pol_Rpb1_2. 1 hit.
PF04983. RNA_pol_Rpb1_3. 1 hit.
PF05000. RNA_pol_Rpb1_4. 1 hit.
PF04998. RNA_pol_Rpb1_5. 1 hit.
PF04992. RNA_pol_Rpb1_6. 1 hit.
PF04990. RNA_pol_Rpb1_7. 1 hit.
PF05001. RNA_pol_Rpb1_R. 19 hits.
SMARTiView protein in SMART
SM00663. RPOLA_N. 1 hit.
PROSITEiView protein in PROSITE
PS00115. RNA_POL_II_REPEAT. 9 hits.

Sequencei

Sequence statusi: Complete.

W6MGR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQFPYSSAP LRTVKEVQFG LLSPEEVRAI SVAKIEYPEI MDLTTMKPRD
60 70 80 90 100
GGLNDPRLGS IDRNFKCQTC GEGMSECPGH FGHIELAKPV FHVGFLSKIK
110 120 130 140 150
KVCECVCMNC GKILLDETNP LYARAMKIKD PKKRFNAVWS LCKTKMVCEV
160 170 180 190 200
DPIPSDENAG EILPQRGGCG NTQPTVRRDG LKIWGTWKKS NLDEDTEQTE
210 220 230 240 250
RRLITAAEVL NVFRHISPQD CQRLGFNEDY ARPEWMLITV LPVPPPPVRP
260 270 280 290 300
SVAFTDTKRG EDDLTYKLAD ILKANINVQK LEMDGSPQHV ISEFEALLQY
310 320 330 340 350
HVATYMDNDI AGQPQALQKT GRPIKSIRAR LKGKEGRLRG NLMGKRVDFS
360 370 380 390 400
ARTVISGDPN LELDQVGVPK SIARTLSYPE TVTPYNIQKL TEYVRNGPNE
410 420 430 440 450
HPGAKYVIRD SGDRIDLRYN KRAGDIALQY GWKVERHLMD DDPVLFNRQP
460 470 480 490 500
SLHKMSMMAH RVKVMPYSTF RMNLSVTSPY NADFDGDEMN LHVPQSEETR
510 520 530 540 550
AELSQICAVP LQIVSPQSNK PVMGIVQDTL CGVRKMTLRD NFIEYDQVMN
560 570 580 590 600
MLFWIPQWDG VIPQPAILKP KPLWSGKQLL STCIPKGIYL QRFDGSLLSP
610 620 630 640 650
KDSGMLIVNG EIMFGVVNKA TVGATAGGLI HTVMREKGPQ VCAQLFGNIQ
660 670 680 690 700
KVVNYWLLHN GFSIGIGDAI ADRETMRVIT ETIGEAKEKV QNIILDAQRN
710 720 730 740 750
LLEPEPGMTV RESFEQKVSK VLNEARDSAG KSAELSLKDS NNVKQMVTAG
760 770 780 790 800
SKGSYINISQ MSACVGQQIV EGKRISFGFA DRSLPHFTKD DYSAESKGFV
810 820 830 840 850
ENSYLRGLTP QEFFFHAMAG REGLIDTAVK TAETGYIQRR LLKALEDIMV
860 870 880 890 900
HYDGTARNSL GDVIQFLYGE DGIDGTQVEK QTVDTIPGTD DAFEKRYRVD
910 920 930 940 950
LMNASQGIKP ELVEYGTEIL GSVELQKLLD EEYTQLLEDR KYLRDVCFSN
960 970 980 990 1000
GDYNWPLPVN IRRIIQNAQQ IFHVDHAKAS DLAIPDIVQG VQELCKRLHV
1010 1020 1030 1040 1050
VRGKSELMQE AQRNATLLFQ CLLRSRLATR RVLEEFRLTK DAFDWVVGTI
1060 1070 1080 1090 1100
EAQFFKSVVH PGEMVGVIAA QSIGEPATQM TLNTFHYAGV SSKNVTLGVP
1110 1120 1130 1140 1150
RLKEILSVAR NVKTPALSVY LEPDVASDIE KAKSIQSAIE HTTLKNVTAA
1160 1170 1180 1190 1200
TEIYYDPDPR STVIEDDIDT VEAYFAIPDE KVEESIHKQS PWLLRLELDR
1210 1220 1230 1240 1250
AKMLDKQLTM SQVAEKISEN FGDDLFIIWS EDNAEKLVIR CRIVRDVKAM
1260 1270 1280 1290 1300
DEEDEETEDG LLKALEAQML ESISLRGIPG ITRVFMMQYD RVWPDQSGDY
1310 1320 1330 1340 1350
AKKKEWVLET DGINLADVIA VPGVDTARTY SNSFVEILSV LGIEAARSAL
1360 1370 1380 1390 1400
YKEILNVIAF DGSYVNYRHL ALLVDVMTTR GHLTAISRHG FNRSDTGALM
1410 1420 1430 1440 1450
RCSFEETVEI LLEAGAAAEL DDCKGVSQNV ILGQLAPIGT GAFDVMVDES
1460 1470 1480 1490 1500
MLNSLSADYP KQNVPIFRGK LTEGSATPYD AGSQYDDDIG QDDTSAVMFS
1510 1520 1530 1540 1550
PIVQSSANDD RSGGFTDYGG FSSYAPNPTT PMSPFSGYGP TSPGISANSP
1560 1570 1580 1590 1600
GYATSPTYSP TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY
1610 1620 1630 1640 1650
SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS
1660 1670 1680 1690 1700
PTSPSYSPTS PSYSPTSPSY SPTSPQYSPT SPQYSPTSPQ YSPTSPSYSP

KED
Length:1,703
Mass (Da):188,682
Last modified:April 16, 2014 - v1
Checksum:iAB1D0026C81FADC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HG793125 Genomic DNA. Translation: CDK25021.1.

Genome annotation databases

EnsemblFungiiCDK25021; CDK25021; KUCA_T00000988001.

Similar proteinsi

Entry informationi

Entry nameiW6MGR1_9ASCO
AccessioniPrimary (citable) accession number: W6MGR1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: November 22, 2017
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported