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Protein

Putative sporulation transcription regulator WhiA

Gene

whiA

Organism
Corynebacterium falsenii DSM 44353
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May be required for sporulation.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation
Biological processTranscription, Transcription regulationUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Putative sporulation transcription regulator WhiAUniRule annotationSAAS annotation
Gene namesi
Name:whiAUniRule annotation
ORF Names:CFAL_05625Imported
OrganismiCorynebacterium falsenii DSM 44353Imported
Taxonomic identifieri1451189 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000019232 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 103WhiA_NInterPro annotationAdd BLAST83
Domaini221 – 303HTH_WhiAInterPro annotationAdd BLAST83

Sequence similaritiesi

Belongs to the WhiA transcriptional regulatory family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK09762.

Family and domain databases

Gene3Di3.10.28.10. 1 hit.
HAMAPiMF_01420. HTH_type_WhiA. 1 hit.
InterProiView protein in InterPro
IPR027434. Homing_endonucl.
IPR018478. Sporu_reg_WhiA_N_dom.
IPR003802. Sporulation_regulator_WhiA.
IPR023054. Sporulation_regulator_WhiA_C.
IPR033981. WhiA-like.
PANTHERiPTHR37307. PTHR37307. 1 hit.
PfamiView protein in Pfam
PF02650. HTH_WhiA. 1 hit.
PF10298. WhiA_N. 1 hit.
TIGRFAMsiTIGR00647. DNA_bind_WhiA. 1 hit.

Sequencei

Sequence statusi: Complete.

W5WQN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALTADVKAE LTKVDVARSD EKLAEVASLL RYTAALHLVN GSIVVEAEVD
60 70 80 90 100
SEDTAHRVST MIEQLFHLEA ELHVVGAGNL RRSPRYILRW EDGGLELARR
110 120 130 140 150
TELIDRAGRP VRGLPRFIIG GTKEQCVAAW RGAFLAHGYL TDPGRSSALE
160 170 180 190 200
VTTPSNEAAL ALVGAARRID VAAKTKEARG THRVVLRDGE SIGRLLLLMG
210 220 230 240 250
ATDAREDWEK QRQYRENRAK ANRLANFDDA NLRRSARAAA AAAIRVNRAL
260 270 280 290 300
DILGDDVPQH LAEAGRLRVE HKEASLEELG RLAEPAMTKD AVAGRIRRLL
310 320
SMADKRAEEL GIPDTQEAVN MELDEG
Length:326
Mass (Da):35,780
Last modified:April 16, 2014 - v1
Checksum:iDE3EE5FED1F964A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP007156 Genomic DNA. Translation: AHI03148.1.
RefSeqiWP_025402720.1. NZ_CP007156.1.

Genome annotation databases

EnsemblBacteriaiAHI03148; AHI03148; CFAL_05625.
KEGGicfn:CFAL_05625.
PATRICifig|1451189.3.peg.1095.

Similar proteinsi

Entry informationi

Entry nameiW5WQN9_9CORY
AccessioniPrimary (citable) accession number: W5WQN9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: September 27, 2017
This is version 20 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported