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Protein
Submitted name:

SEC22 homolog B, vesicle trafficking protein b

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SEC22 homolog B, vesicle trafficking protein bImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei197 – 218HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 123LonginInterPro annotationAdd BLAST118
Domaini138 – 198V-SNARE coiled-coil homologyInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the synaptobrevin family.SAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00510000046833.
OMAiMLCASVD.
OrthoDBiEOG091G0MPE.

Family and domain databases

InterProiView protein in InterPro
IPR011012. Longin-like_dom_sf.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
PfamiView protein in Pfam
PF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
SMARTiView protein in SMART
SM01270. Longin. 1 hit.
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiView protein in PROSITE
PS50859. LONGIN. 1 hit.
PS50892. V_SNARE. 1 hit.

Sequencei

Sequence statusi: Complete.

W5MVY4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLLTMIARV ADGLPLAASM QEDEQGSEKS GRDLQQYQSQ AKQLFRKLNE
60 70 80 90 100
QSPTRCTLEA GSMAFHYVIE KGVCYLVLCE AGFPKKLAFA YLEDLQAEFD
110 120 130 140 150
EQHGKKVPTV SRPYFFIEFD TYIQKTKKSY IDSRARRNLG NINTELQDVQ
160 170 180 190 200
RIMVANIEEV LQRGEALSAL DSKASNLSSL SKKYRSDAKY LNTRSTYAKL
210
AAGAVFFIML IVYVRFWWL
Length:219
Mass (Da):25,012
Last modified:April 16, 2014 - v1
Checksum:iFC4B4AFAD964C677
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01000122 Genomic DNA. No translation available.
AHAT01000123 Genomic DNA. No translation available.
AHAT01000124 Genomic DNA. No translation available.
RefSeqiXP_015211383.1. XM_015355897.1.

Genome annotation databases

EnsembliENSLOCT00000012566; ENSLOCP00000012543; ENSLOCG00000010249.
GeneIDi102690216.

Similar proteinsi

Entry informationi

Entry nameiW5MVY4_LEPOC
AccessioniPrimary (citable) accession number: W5MVY4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: November 22, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported