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Protein
Submitted name:

PHD finger protein 21Ab

Gene
N/A
Organism
Lepisosteus oculatus (Spotted gar)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AbImported
OrganismiLepisosteus oculatus (Spotted gar)Imported
Taxonomic identifieri7918 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiHolosteiSemionotiformesLepisosteidaeLepisosteus
Proteomesi
  • UP000018468 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini499 – 546PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 57Sequence analysisAdd BLAST28
Coiled coili573 – 604Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063984.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

W5MEH2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK
60 70 80 90 100
QKKVVEQLRK DLLVSKEQPE VKLQAQPALP PPPPGDGKHA PPAPAPTEAK
110 120 130 140 150
ALVQPAPAQL PLSLLAQNAP AQQKTVTVTP VIATKTLPLV LKAAAQTMPA
160 170 180 190 200
SVVTQRPTVA MVTAISNTQK TSANTDMQNA PINLQTSSKL ASPGTEAVRI
210 220 230 240 250
VSKNAVTLVQ ATTTAHTIKV PQFIPPPRLT PRPNFLPQVR PKPITPNNVP
260 270 280 290 300
IAPAPPPMLA APQLIQRPVM LTKVTATSLP TATGSIHQVR IMNGQPCATI
310 320 330 340 350
AKTISPAQLT SIVITAPGTR IAGSQTLQIS SANTDAKTVK VQGGTEDKSP
360 370 380 390 400
VTVSPSPPPP APAPPKPKRE DNPQKLAFMV SLGLVTHDHL EEIQSRRQER
410 420 430 440 450
KRRTTANPVY SGAVFEPERK KSAVTYLNSP IHQGTRKRGR PPKFNSVPEL
460 470 480 490 500
GSLTPTSPPS SLPSSPAHEK TEIGGFHFPV LSQNLPLPSP NSGDGDIHED
510 520 530 540 550
FCTVCRRSGQ LLMCDTCSRV YHLDCLDPPL KAIPKGMWIC PKCQDQILKK
560 570 580 590 600
EEAIPWPGTL AIVHSYIAYK AAKEEEKQKL VKWSTELKQE RDLLEQKVKQ
610 620 630 640 650
LSNSITKCME TKNTMLARQK EMQASLEKVK RLFRLVQGTQ GPTKPAEGAQ
660 670 680 690
DAEGVANGTD GGGGGSREED DTRSNGKTSE PSQQPAVTLS SSDTK
Length:695
Mass (Da):75,007
Last modified:April 16, 2014 - v1
Checksum:i62C5DEB34D9BBE56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AHAT01036566 Genomic DNA. No translation available.
AHAT01036567 Genomic DNA. No translation available.
AHAT01036568 Genomic DNA. No translation available.
RefSeqiXP_015194093.1. XM_015338607.1.

Genome annotation databases

EnsembliENSLOCT00000006789; ENSLOCP00000006781; ENSLOCG00000005618.
GeneIDi102694453.

Similar proteinsi

Entry informationi

Entry nameiW5MEH2_LEPOC
AccessioniPrimary (citable) accession number: W5MEH2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 16, 2014
Last sequence update: April 16, 2014
Last modified: September 27, 2017
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported