Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Sorting nexin-1

Gene
N/A
Organism
Callorhinchus milii (Ghost shark)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sorting nexin-1Imported
OrganismiCallorhinchus milii (Ghost shark)Imported
Taxonomic identifieri7868 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataChondrichthyesHolocephaliChimaeriformesCallorhinchidaeCallorhinchus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini121 – 250PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili103 – 123Sequence analysisAdd BLAST21
Coiled coili341 – 361Sequence analysisAdd BLAST21
Coiled coili424 – 444Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OrthoDBiEOG091G06FB.

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
3.30.1520.10. 1 hit.
InterProiView protein in InterPro
IPR027267. AH/BAR_dom_sf.
IPR001683. Phox.
IPR036871. PX_dom_sf.
IPR028660. SNX1.
IPR005329. Sorting_nexin_N.
IPR015404. Vps5_C.
PANTHERiPTHR10555:SF129. PTHR10555:SF129. 1 hit.
PfamiView protein in Pfam
PF00787. PX. 1 hit.
PF03700. Sorting_nexin. 1 hit.
PF09325. Vps5. 1 hit.
SMARTiView protein in SMART
SM00312. PX. 1 hit.
SUPFAMiSSF103657. SSF103657. 2 hits.
SSF64268. SSF64268. 1 hit.
PROSITEiView protein in PROSITE
PS50195. PX. 1 hit.

Sequencei

Sequence statusi: Complete.

V9KAI8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEECTPPPL LETEEESTEG EDIFTGAASP SEMDLMKTLS SNSKANGIHP
60 70 80 90 100
QDDDQDIFAE ATVELSLDNS QNDYNKCQTK LPSTDPSLMV PSNTASQPQA
110 120 130 140 150
KTYKELEMMV AEEEEENEDQ FDLKVTVTEP EKVGDGMTAY MAYRVSTLTS
160 170 180 190 200
LQMFKRKDFS VKRRFSDFLG LYDRLLEKHS QNGFIVPPPP EKSLIGMTKV
210 220 230 240 250
KVGKDDSSSA EFLERRRAAL ERYLQRIVKH PTLLQDPDVR EFLEKDELPR
260 270 280 290 300
AVSTQALSGA GLLRMVNKAA DAVSKMTIKM NESDIWFEEK FQEIESEDQQ
310 320 330 340 350
LRKLHAVVET LVNHRKELAM NTAIVAKSTA MLGSSEDHTA LSRALSQLAE
360 370 380 390 400
VEDKIEQLYQ DQANNDFFLF AELLSDYIRL LSAMRGVFDQ RMKTWQRWQD
410 420 430 440 450
AQTTLQKKRE IEARLIWANK PDKLQQAKDE ISEWESKVVQ CEREFERISA
460 470 480 490 500
TIRREVARFE KEKTQDFKSR VVAYLETLLN SQQQLVKYWE AFLPEAKAIA
Length:500
Mass (Da):57,314
Last modified:March 19, 2014 - v1
Checksum:i891175134E58F80A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JW862666 mRNA. Translation: AFO95183.1.
RefSeqiXP_007906903.1. XM_007908712.1.

Genome annotation databases

GeneIDi103188658.

Similar proteinsi

Entry informationi

Entry nameiV9KAI8_CALMI
AccessioniPrimary (citable) accession number: V9KAI8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 19, 2014
Last sequence update: March 19, 2014
Last modified: December 20, 2017
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)