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Protein
Submitted name:

Structural maintenance of chromosomes protein 1A

Gene

SMC1A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Structural maintenance of chromosomes protein 1AImported
Gene namesi
Name:SMC1AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000072501.17.
HGNCiHGNC:11111. SMC1A.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000072501.

PTM / Processingi

Proteomic databases

MaxQBiV9GY57.
PaxDbiV9GY57.
PeptideAtlasiV9GY57.
PRIDEiV9GY57.

Expressioni

Gene expression databases

BgeeiENSG00000072501.
ExpressionAtlasiV9GY57. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliV9GY57.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili89 – 113Sequence analysisAdd BLAST25
Coiled coili121 – 162Sequence analysisAdd BLAST42

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0018. Eukaryota.
COG1196. LUCA.
GeneTreeiENSGT00580000081569.

Family and domain databases

InterProiView protein in InterPro
IPR027417. P-loop_NTPase.
IPR029683. SMC1A_metazoan.
PANTHERiPTHR18937:SF170. PTHR18937:SF170. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Fragment.

V9GY57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XMTHLQKEVT AIETKLEQKR SDRHNLLQAC KMQDIKLPLS KGTMDDISQE
60 70 80 90 100
EGSSQGEDSV SGSQRISSIY AREALIEIDY GDLCEDLKDA QAEEEIKQEM
110 120 130 140 150
NTLQQKLNEQ QSVLQRIAAP NMKAMEKLES VRDKFQETSD EFEAARKRAK
160 170 180 190 200
KAKQAFEQIK KERFDRFNAC FESVATNIDE IYKALSRNSS AQAFLGPENP
210 220 230 240 250
EEPYLDGINY NCVAPGKRFR PMDNLSGGEK TVAALALLFA IHRWQITSRS
260 270
SRLATSRPSS SLSRRSSTPR PRASLESIL
Length:279
Mass (Da):31,536
Last modified:February 19, 2014 - v1
Checksum:i29076E59C9B6D8F2
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei279Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC233728 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000470241; ENSP00000476416; ENSG00000072501.
UCSCiuc064zkt.1. human.

Entry informationi

Entry nameiV9GY57_HUMAN
AccessioniPrimary (citable) accession number: V9GY57
Entry historyiIntegrated into UniProtKB/TrEMBL: February 19, 2014
Last sequence update: February 19, 2014
Last modified: October 25, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported