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V5U5A3 (V5U5A3_CROSK) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. SAAS SAAS001998 RuleBase RU000609 HAMAP-Rule MF_00455

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. SAAS SAAS001998 RuleBase RU000610 HAMAP-Rule MF_00455

Subcellular location

Cytoplasm By similarity RuleBase RU000610 HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1011 By similarity HAMAP-Rule MF_00455
Active site1041 By similarity HAMAP-Rule MF_00455
Metal binding2321Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2681Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2681Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2711Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2961Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3071Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3091Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3391Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
V5U5A3 [UniParc].

Last modified February 19, 2014. Version 1.
Checksum: C96B009BF79449C7

FASTA44049,838
        10         20         30         40         50         60 
MPTYFDQLER VRYEGPKTTN PLAFRHYNPD ELVAGKRMED HLRFAACYWH TFCWNGSDMF 

        70         80         90        100        110        120 
GVGAFERPWQ QAGDALSLAK RKADVAFEFF HKLNVPYYCF HDVDVSPEGA SLKEYLNNFA 

       130        140        150        160        170        180 
QMVEVLAQKQ QESGVKLLWG TANCFTHPRY GAGAATNPDP EVFSWAATQV VTAMNATHQL 

       190        200        210        220        230        240 
GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKTGFRGTLL IEPKPQEPTK 

       250        260        270        280        290        300 
HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIASAIALG LFGSVDANRG 

       310        320        330        340        350        360 
DPQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM 

       370        380        390        400        410        420 
DTMALSLKVA AKMLEEGELD KRVARRYAGW NGELGQQILK GQMTLAELAQ YAEQHNLAPQ 

       430        440 
HQSGHQEQLE NLVNYYLFDK 

« Hide

References

[1]"Complete Genome Sequence of Cronobacter sakazakii Strain CMCC 45402."
Zhao Z., Wang L., Wang B., Liang H., Ye Q., Zeng M.
Genome Announc. 2:e01139-13(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CMCC45402 EMBL AHB72327.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006731 Genomic DNA. Translation: AHB72327.1.
RefSeqYP_008898727.1. NC_023032.1.

3D structure databases

ProteinModelPortalV5U5A3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID17871569.
KEGGcsi:P262_05567.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameV5U5A3_CROSK
AccessionPrimary (citable) accession number: V5U5A3
Entry history
Integrated into UniProtKB/TrEMBL: February 19, 2014
Last sequence update: February 19, 2014
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)