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Protein
Submitted name:

IMV membrane protein

Gene

W86/88-1-084

Organism
Vaccinia virus WAU86/88-1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
IMV membrane proteinImported
Gene namesi
ORF Names:W86/88-1-084Imported
OrganismiVaccinia virus WAU86/88-1Imported
Taxonomic identifieri1651169 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirusVaccinia virus
Proteomesi
  • UP000103384 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei186 – 204HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliV5R0G4.
SMRiV5R0G4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.

Sequencei

Sequence statusi: Complete.

V5R0G4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAAASIQTT VNTLSERISS KLEQEANASA QTKCDIEIGN FYIRQNHGCN
60 70 80 90 100
LTVKNMCSAD ADAQLDAVLS AATETYSGLT PEQKAYVPAM FTAALNIQTS
110 120 130 140 150
VNTVVRDFEN YVKQTCNSSA VVDNKLKIQN VIIDECYGAP GSPTNLEFIN
160 170 180 190 200
TGSSKGNCAI KALMQLTTKA TTQIAPRQVA GTGVQFYMIV IGVIILAALF
210 220 230 240 250
MYYAKRMLFT STNDKIKLIL ANKENVHWTT YMDTFFRTSP MVIATTDMQN
Length:250
Mass (Da):27,307
Last modified:July 22, 2015 - v1
Checksum:i28E1ABB817410A2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KF866253 Genomic DNA. Translation: AHB23528.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KF866253 Genomic DNA. Translation: AHB23528.1.

3D structure databases

ProteinModelPortaliV5R0G4.
SMRiV5R0G4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR003472. Virion_mem_poxvirus_L1.
PfamiView protein in Pfam
PF02442. L1R_F9L. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiV5R0G4_9POXV
AccessioniPrimary (citable) accession number: V5R0G4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: March 15, 2017
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.