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Protein

Glutamate decarboxylase

Gene

gadB

Organism
Brucella ceti TE28753-12
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadBImported
ORF Names:V568_201023Imported
OrganismiBrucella ceti TE28753-12Imported
Taxonomic identifieri1407053 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000027607: Chromosome II

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

V5PKI5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTGSNYPARD LIASVFGTEA LQEIAASRGF REKEMQANAV YQIIHDELFL
60 70 80 90 100
DGNARQNLAT FCQTWDDDYV HKLMDLSINK NWIDKEEYPQ SAAIDLRCVN
110 120 130 140 150
MVADLWNAPK FADNATGTNT IGSSEACMLG GMAMKWRWRK KMQEMGKPTD
160 170 180 190 200
KPNFVCGPVQ VCWHKFARYW DVEIREIPME PGRLFMGPEQ MLEAVDENTI
210 220 230 240 250
GVVPTFGVTY TGNYEFPEPL QDALDKLQKT KGLDIDIHVD AASGGFLAPF
260 270 280 290 300
CAPDIPWDFR LPRVKSISAS GHKYGLAPLG CGWVVWRDKE ALPEELIFNV
310 320 330 340 350
DYLGGQVGTF AINFSRPAGQ VISQYYEFMR LGREGYTKVQ QAAYRVAQYI
360 370 380 390 400
AREIEPLGPY EFICAGEEKG GIPAVCFRIR EGEDPGYSLY DLSERLRLTG
410 420 430 440 450
WQVPAFALSG KASDITVMRV MCRRGFEMDL AALFIRDFKA GIEFFKSHPS
460
PKITPSMGTG FHHT
Length:464
Mass (Da):52,243
Last modified:February 19, 2014 - v1
Checksum:i27B985543E36E162
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006899 Genomic DNA. Translation: AHB03501.1.
RefSeqiYP_008843978.1. NC_022908.1.

Genome annotation databases

EnsemblBacteriaiAHB03501; AHB03501; V568_201023.
GeneIDi17717793.
KEGGibcee:V568_201023.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006899 Genomic DNA. Translation: AHB03501.1.
RefSeqiYP_008843978.1. NC_022908.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAHB03501; AHB03501; V568_201023.
GeneIDi17717793.
KEGGibcee:V568_201023.

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "whole genome sequencing of Brucella ceti strain TE28753-12 isolated in Adriatic Sea."
    Ancora M., Garofolo G., Marcacci M., Zilli K., Di Giannatale E., Orsini M., Camma' C.
    Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: TE28753-12Imported.

Entry informationi

Entry nameiV5PKI5_9RHIZ
AccessioniPrimary (citable) accession number: V5PKI5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 19, 2014
Last sequence update: February 19, 2014
Last modified: February 4, 2015
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.