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V5PKI5 (V5PKI5_9RHIZ) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL AHB03501.1
Gene names
Name:gadB EMBL AHB03501.1
ORF Names:V568_201023 EMBL AHB03501.1
OrganismBrucella ceti TE28753-12 EMBL AHB03501.1
Taxonomic identifier1407053 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
V5PKI5 [UniParc].

Last modified February 19, 2014. Version 1.
Checksum: 27B985543E36E162

FASTA46452,243
        10         20         30         40         50         60 
MTGSNYPARD LIASVFGTEA LQEIAASRGF REKEMQANAV YQIIHDELFL DGNARQNLAT 

        70         80         90        100        110        120 
FCQTWDDDYV HKLMDLSINK NWIDKEEYPQ SAAIDLRCVN MVADLWNAPK FADNATGTNT 

       130        140        150        160        170        180 
IGSSEACMLG GMAMKWRWRK KMQEMGKPTD KPNFVCGPVQ VCWHKFARYW DVEIREIPME 

       190        200        210        220        230        240 
PGRLFMGPEQ MLEAVDENTI GVVPTFGVTY TGNYEFPEPL QDALDKLQKT KGLDIDIHVD 

       250        260        270        280        290        300 
AASGGFLAPF CAPDIPWDFR LPRVKSISAS GHKYGLAPLG CGWVVWRDKE ALPEELIFNV 

       310        320        330        340        350        360 
DYLGGQVGTF AINFSRPAGQ VISQYYEFMR LGREGYTKVQ QAAYRVAQYI AREIEPLGPY 

       370        380        390        400        410        420 
EFICAGEEKG GIPAVCFRIR EGEDPGYSLY DLSERLRLTG WQVPAFALSG KASDITVMRV 

       430        440        450        460 
MCRRGFEMDL AALFIRDFKA GIEFFKSHPS PKITPSMGTG FHHT 

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References

[1]"whole genome sequencing of Brucella ceti strain TE28753-12 isolated in Adriatic Sea."
Ancora M., Garofolo G., Marcacci M., Zilli K., Di Giannatale E., Orsini M., Camma' C.
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: TE28753-12 EMBL AHB03501.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006899 Genomic DNA. Translation: AHB03501.1.
RefSeqYP_008843978.1. NC_022908.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID17717793.
KEGGbcee:V568_201023.

Phylogenomic databases

KOK01580.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameV5PKI5_9RHIZ
AccessionPrimary (citable) accession number: V5PKI5
Entry history
Integrated into UniProtKB/TrEMBL: February 19, 2014
Last sequence update: February 19, 2014
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)