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Protein
Submitted name:

Uncharacterized protein

Gene

EUTSA_v10020006mg

Organism
Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Component of the post-replicative DNA mismatch repair system (MMR).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processDNA damage, DNA repairUniRule annotation
LigandNucleotide-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:EUTSA_v10020006mgImported
OrganismiEutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)Imported
Taxonomic identifieri72664 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeEutremeaeEutrema
Proteomesi
  • UP000030689 Componenti: Unassembled WGS sequence

Subcellular locationi

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini740 – 756DNA_MISMATCH_REPAIR_2InterPro annotationAdd BLAST17

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili370 – 390Sequence analysisAdd BLAST21
Coiled coili466 – 493Sequence analysisAdd BLAST28
Coiled coili906 – 926Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the DNA mismatch repair MutS family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

KOiK08735

Family and domain databases

Gene3Di3.30.420.110, 1 hit
3.40.1170.10, 1 hit
InterProiView protein in InterPro
IPR011184 DNA_mismatch_repair_Msh2
IPR007695 DNA_mismatch_repair_MutS-lik_N
IPR000432 DNA_mismatch_repair_MutS_C
IPR007861 DNA_mismatch_repair_MutS_clamp
IPR007696 DNA_mismatch_repair_MutS_core
IPR016151 DNA_mismatch_repair_MutS_N
IPR036187 DNA_mismatch_repair_MutS_sf
IPR007860 DNA_mmatch_repair_MutS_con_dom
IPR032642 Msh2
IPR036678 MutS_con_dom_sf
IPR027417 P-loop_NTPase
PANTHERiPTHR11361:SF35 PTHR11361:SF35, 1 hit
PfamiView protein in Pfam
PF01624 MutS_I, 1 hit
PF05188 MutS_II, 1 hit
PF05192 MutS_III, 1 hit
PF05190 MutS_IV, 1 hit
PF00488 MutS_V, 1 hit
PIRSFiPIRSF005813 MSH2, 1 hit
SMARTiView protein in SMART
SM00534 MUTSac, 1 hit
SM00533 MUTSd, 1 hit
SUPFAMiSSF48334 SSF48334, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00486 DNA_MISMATCH_REPAIR_2, 1 hit

Sequencei

Sequence statusi: Complete.

V4M6V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGNFEEQNK LPELKLDAKQ AQGFLSFFKT LPTDSRAVRF FDRKGYYTAH
60 70 80 90 100
GENSIFIAKT YYHTTTALRQ LGSGSNALSS VSISKNMFET IARDLLLERN
110 120 130 140 150
DHTLELYEGS GSNWRLVKTG SPGNIGSFED VLFANNEMQD TPVVVSLFPN
160 170 180 190 200
FQESRCVIGM AYVDLTRRIL GLAEFLDDSR FTNLESSLVA IGAKECIFPA
210 220 230 240 250
DSGKSSECKS LYESLERCSV MITERKRQEF KGRDLDSDLK RLVKGNVEPV
260 270 280 290 300
RDLISGFELA TPALGALLSF SELLSDEGNY GNFSIRRYDI GGFMRLDAAA
310 320 330 340 350
MRALNVMESK TDANKNFSLF GLMNRTCTAG MGKRLLHMWL KQPLVDLNEI
360 370 380 390 400
QMRLDIVQCF VEEAGLRQDL RQHLKRISDV ERLVRSLERR RGGLQQIIKL
410 420 430 440 450
YQSTIRLPFI KTSLQQYTGE FSSLISKRYM KKLEALTDAD HLGKFIELVE
460 470 480 490 500
YSVDLDQLEN GEYMISSSYD TTLSSLKDQK ESLEQQIHEL HKKTAMELDL
510 520 530 540 550
QVDKALKLDK AAQFGHVFRI TKKEEPKIRK KLTTQFVVLE TRKDGVKFTN
560 570 580 590 600
TKLKKLGDQY QSVVDDYKSC QKELVDRVVQ TVASFSEVFE ELAGLLSEMD
610 620 630 640 650
VLLSFADLAA SCPTPYCRPE ITSSDMGDIV LEGSRHPCVE AQDWVNFIPN
660 670 680 690 700
DCRLMRGKSW FQIITGPNMG GKSTFIRQVG VTVLMAQVGS FVPCDKASIS
710 720 730 740 750
IRDCIFARVG AGDCQLRGVS TFMQEMLETA SILKGATDKS LIIIDELGRG
760 770 780 790 800
TSTYDGFGLA WAICEHLVQV KKAPTLFATH FHELTALAQA NSEVAGNTAG
810 820 830 840 850
VANFHVSAHI DAESRKLTML YKVEPGACDQ SFGIHVAEFA NFPESVVALA
860 870 880 890 900
REKAAELEDF SPSSMIINNE ESGKRKSRED DPEEVSRGAA RAHKFLKEFA
910 920 930
EMPLDKMELK DSLQRVREMK EELEKDAVDC HWLKRFL
Length:937
Mass (Da):105,438
Last modified:January 22, 2014 - v1
Checksum:i3781C6D6832461B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KI517408 Genomic DNA Translation: ESQ48048.1
RefSeqiXP_006406595.1, XM_006406532.1

Genome annotation databases

KEGGieus:EUTSA_v10020006mg

Similar proteinsi

Entry informationi

Entry nameiV4M6V1_EUTSA
AccessioniPrimary (citable) accession number: V4M6V1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 22, 2014
Last sequence update: January 22, 2014
Last modified: April 25, 2018
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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