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Protein

RNA polymerase II transcription factor B subunit 2

Gene

Moror_975

Organism
Moniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) (Crinipellis roreri)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
ORF Names:Moror_975Imported
OrganismiMoniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) (Crinipellis roreri)Imported
Taxonomic identifieri1381753 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesMarasmiaceaeMoniliophthora
Proteomesi
  • UP000017559 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

KOiK03144.
OrthoDBiEOG092C3703.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.
TIGRFAMsiTIGR00625. tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

V2XSW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRQARQDDDT NPDSASNPHS LLPFLQVQSP TSLSRLYQSP SSCLSIFRLL
60 70 80 90 100
APVERQIVMN MLWLESAMTP STLAAWVTAE GQKLYESSLD TLSRLHILHN
110 120 130 140 150
YPAKLALNST FKMSLRHAIT GGGTTGSFGV PAEKDEKRAP LDIDGLDSYA
160 170 180 190 200
LERWETILHF MVSSGTGQNP QRPSPGVLYL LQRSGLMGSH HGSVPQITSA
210 220 230 240 250
GFQFLLHPSH AQLWNLLLQY LHMAEERQMD LVEVLSFLFM LSTMELGREY
260 270 280 290 300
STEHLSQTQR AMLEDLRDYG LLWQRRPNSR RFSPTRLATT LTSSSPTLPT
310 320 330 340 350
NAGTSSGSQQ GFIVLETNYR VYAYTDNPLQ TAILHLFVSL KYRFPNLVVG
360 370 380 390 400
SITRESVKKA LSNGISADQI ISYLITHAHP QMRKNNPLLP VTVQDQIRLW
410 420 430 440 450
ELEKNRLKSQ EGYLYTGFAS QADYEFVLSY AKQLDVVLWE SSAKRSFFGS
460
TEGHANIRNF IERRAGQGS
Length:469
Mass (Da):52,788
Last modified:January 22, 2014 - v1
Checksum:i3DBCCB12D7BD4D7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWSO01000057 Genomic DNA. Translation: ESK95946.1.
RefSeqiXP_007844759.1. XM_007846568.1.

Genome annotation databases

EnsemblFungiiESK95946; ESK95946; Moror_975.
GeneIDi19298076.
KEGGimrr:Moror_975.

Similar proteinsi

Entry informationi

Entry nameiV2XSW4_MONRO
AccessioniPrimary (citable) accession number: V2XSW4
Entry historyiIntegrated into UniProtKB/TrEMBL: January 22, 2014
Last sequence update: January 22, 2014
Last modified: October 25, 2017
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported