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Protein

Alpha-amylase

Gene

U471_02870

Organism
Bacillus amyloliquefaciens CC178
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:U471_02870Imported
OrganismiBacillus amyloliquefaciens CC178Imported
Taxonomic identifieri1412898 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000017759: Chromosome

Structurei

3D structure databases

ProteinModelPortaliU5X0J1.
SMRiU5X0J1. Positions 46-466.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

U5X0J1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFEKRFKTSL LPLFAGFLLL FHLVLSGPAA ANAETANKSN KVTASSVKNG
60 70 80 90 100
TILHAWNWSF NTLTQNMKDI RDAGYAAIQT SPINQVKEGN QGDKSMRNWY
110 120 130 140 150
WLYQPTSYQI GNRYLGTEQE FKDMCAAAEK YGVKVIVDAV INHTTSDYGA
160 170 180 190 200
ISDEIKRIPN WTHGNTQIKN WSDRWDVTQN SLLGLYDWNT QNTEVQVYLK
210 220 230 240 250
RFLERALNDG ADGFRYDAAK HIELPDDGNY GSQFWPNITN TSAEFQYGEI
260 270 280 290 300
LQDSASRDTA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSAD
310 320 330 340 350
KLVTWVESHD TYANDDEEST WMSDDDIRLG WAVIGSRSGS TPLFFSRPEG
360 370 380 390 400
GGNGVRFPGK SQIGDRGSAL FKDQAITAVN TFHNVMAGQP EELSNPNGNN
410 420 430 440 450
QVFMNQRGSK GVVLANAGSS SVTINTSAKL PDGRYDNRAG AGSFQVANGK
460 470 480 490 500
LTGTINARSA AVLYPDDIGN APHVFLENYQ TGAVHSFNDQ LTVTLRANAK
510 520 530 540 550
TTKAVYQINN GQQTAFKDGD RLTIGKGDPI GTTYNIKLTG TNGEGAARTQ
560 570 580 590 600
EYTFVKKDPS QTNIIGYQNP DHWGQVNAYI YKHDGGRAIE LTGSWPGKAM
610 620 630 640 650
TKNANGMYTL TLPENTDTAN AKVIFNNGSA QVPGQNQPGF DYVQNGLYNN

SGLNGYLPH
Length:659
Mass (Da):72,454
Last modified:January 22, 2014 - v1
Checksum:i2AB36D086C439CC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006845 Genomic DNA. Translation: AGZ55003.1.
RefSeqiWP_011996291.1. NC_022653.1.
YP_008725581.1. NC_022653.1.

Genome annotation databases

EnsemblBacteriaiAGZ55003; AGZ55003; U471_02870.
GeneIDi17434547.
KEGGibamc:U471_02870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006845 Genomic DNA. Translation: AGZ55003.1.
RefSeqiWP_011996291.1. NC_022653.1.
YP_008725581.1. NC_022653.1.

3D structure databases

ProteinModelPortaliU5X0J1.
SMRiU5X0J1. Positions 46-466.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGZ55003; AGZ55003; U471_02870.
GeneIDi17434547.
KEGGibamc:U471_02870.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the biocontrol bacterium, Bacillus amyloliquefaciens strain CC178."
    Kim B.-Y., Weon H.-Y.
    Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CC178Imported.

Entry informationi

Entry nameiU5X0J1_BACAM
AccessioniPrimary (citable) accession number: U5X0J1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 22, 2014
Last sequence update: January 22, 2014
Last modified: January 7, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.