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U5X0J1 (U5X0J1_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
ORF Names:U471_02870 EMBL AGZ55003.1
OrganismBacillus amyloliquefaciens CC178 [Complete proteome] EMBL AGZ55003.1
Taxonomic identifier1412898 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
U5X0J1 [UniParc].

Last modified January 22, 2014. Version 1.
Checksum: 2AB36D086C439CC2

FASTA65972,454
        10         20         30         40         50         60 
MFEKRFKTSL LPLFAGFLLL FHLVLSGPAA ANAETANKSN KVTASSVKNG TILHAWNWSF 

        70         80         90        100        110        120 
NTLTQNMKDI RDAGYAAIQT SPINQVKEGN QGDKSMRNWY WLYQPTSYQI GNRYLGTEQE 

       130        140        150        160        170        180 
FKDMCAAAEK YGVKVIVDAV INHTTSDYGA ISDEIKRIPN WTHGNTQIKN WSDRWDVTQN 

       190        200        210        220        230        240 
SLLGLYDWNT QNTEVQVYLK RFLERALNDG ADGFRYDAAK HIELPDDGNY GSQFWPNITN 

       250        260        270        280        290        300 
TSAEFQYGEI LQDSASRDTA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSAD 

       310        320        330        340        350        360 
KLVTWVESHD TYANDDEEST WMSDDDIRLG WAVIGSRSGS TPLFFSRPEG GGNGVRFPGK 

       370        380        390        400        410        420 
SQIGDRGSAL FKDQAITAVN TFHNVMAGQP EELSNPNGNN QVFMNQRGSK GVVLANAGSS 

       430        440        450        460        470        480 
SVTINTSAKL PDGRYDNRAG AGSFQVANGK LTGTINARSA AVLYPDDIGN APHVFLENYQ 

       490        500        510        520        530        540 
TGAVHSFNDQ LTVTLRANAK TTKAVYQINN GQQTAFKDGD RLTIGKGDPI GTTYNIKLTG 

       550        560        570        580        590        600 
TNGEGAARTQ EYTFVKKDPS QTNIIGYQNP DHWGQVNAYI YKHDGGRAIE LTGSWPGKAM 

       610        620        630        640        650 
TKNANGMYTL TLPENTDTAN AKVIFNNGSA QVPGQNQPGF DYVQNGLYNN SGLNGYLPH 

« Hide

References

[1]"Complete genome sequence of the biocontrol bacterium, Bacillus amyloliquefaciens strain CC178."
Kim B.-Y., Weon H.-Y.
Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CC178 EMBL AGZ55003.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006845 Genomic DNA. Translation: AGZ55003.1.
RefSeqYP_008725581.1. NC_022653.1.

3D structure databases

ProteinModelPortalU5X0J1.
SMRU5X0J1. Positions 46-466.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID17434547.
KEGGbamc:U471_02870.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameU5X0J1_BACAM
AccessionPrimary (citable) accession number: U5X0J1
Entry history
Integrated into UniProtKB/TrEMBL: January 22, 2014
Last sequence update: January 22, 2014
Last modified: July 9, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)