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U5VGI7 (U5VGI7_9PSED) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PVLB_09850 EMBL AGZ34766.1
OrganismPseudomonas sp. VLB120 [Complete proteome] EMBL AGZ34766.1
Taxonomic identifier69328 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length1103 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
U5VGI7 [UniParc].

Last modified January 22, 2014. Version 1.
Checksum: AA19708C743F11CF

FASTA1,103125,150
        10         20         30         40         50         60 
MAKRSRPAAF IDDPLWYKDA VIYQLHVKSF FDANNDGIGD FPGLINKLDY IAELGVNTLW 

        70         80         90        100        110        120 
LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DAKRFIAEAH KRGLRVITEL VINHTSDQHP 

       130        140        150        160        170        180 
WFQRARHAKR GSKARDFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ 

       190        200        210        220        230        240 
PDLNFDNPQV LKAVIGVMRF WLDMGVDGLR LDAIPYLIER DGTNNENLPE THQVLKAIRA 

       250        260        270        280        290        300 
EIDANYPDRM LLAEANQWPE DTHPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD 

       310        320        330        340        350        360 
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN LGIRRRLAPL 

       370        380        390        400        410        420 
LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD RDGVRTPMQW SPDRNGGFSK 

       430        440        450        460        470        480 
ADPQRLVLPP IMDPLYGYQT VNAEAQSHDP HSLLNWNRRL LAVRKQQKAF GRGTFKMLTP 

       490        500        510        520        530        540 
SNRRILAYLR EYTDANGNTE VILCVANVSR AAQAAELELS PYADMVPVEM LGGSAFPPIG 

       550        560        570        580        590        600 
QLPFLLTLPP YAFYWFLLTS HDRMPSWHIQ PSEGLPELTT LVLRKRMEEL LDAPCRDTLE 

       610        620        630        640        650        660 
TAILPQYLPK RRWYAGKEGP LDQVQLSYGV RLATATTPVL LSEIEVRSED TVTRYQLPFG 

       670        680        690        700        710        720 
LLPEEQITTA LPQQLALSRV RRGRQVGLIT DAFVLEPFIR AVLRNCEAGT RLPCTAGELR 

       730        740        750        760        770        780 
FERTDLLAAA GLSEESQVRY LGAEQSNSSV VVADRVVLKL IRRVNAGVHP ELEMSAYLAA 

       790        800        810        820        830        840 
AGFTNISPLL AWVSRVDEQG TPHLLMIAQG YLSNQGDAWA WTQNTLERAI RDQMEPSSNT 

       850        860        870        880        890        900 
PDAHADALAE LNGFAALLGQ RLGEMHLLLA RPSDDPAFTP RPSDARDSKR WSEQITAELA 

       910        920        930        940        950        960 
RALDLLAQHR DSLDADSQAL VDDLQQQRDG LAQHIDNLAR QAQGGLLMRV HGDLHLGQVL 

       970        980        990       1000       1010       1020 
VVQGDAYLID FEGEPARPLD ERRAKHSPYK DVTGVLRSFD YAAAMILRSA SAVDLSDAAR 

      1030       1040       1050       1060       1070       1080 
QARQRVARQY LHQSRHAFVE AYGLATAAMP HAWQQAEGER AALELFCLEK AAYEITYEAE 

      1090       1100 
NRPSWLAVPL HGLHGLISTW GES 

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References

[1]"Complete genome sequence of Pseudomonas sp. VLB120, a solvent tolaerant, styrene degrading bacterium isolated from soil."
Ruckert C., Koehler K.A.K., Blank L.M., Albersmeier A., Szczepanowski R., Kalinowski J., Schmid A.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: VLB120 EMBL AGZ34766.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003961 Genomic DNA. Translation: AGZ34766.1.
RefSeqYP_008762893.1. NC_022738.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGZ34766; AGZ34766; PVLB_09850.
GeneID17496582.
KEGGpsv:PVLB_09850.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameU5VGI7_9PSED
AccessionPrimary (citable) accession number: U5VGI7
Entry history
Integrated into UniProtKB/TrEMBL: January 22, 2014
Last sequence update: January 22, 2014
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)