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U3QC62 (U3QC62_BIFAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length534 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
U3QC62 [UniParc].

Last modified December 11, 2013. Version 1.
Checksum: 9C0A2A5077B9CCB5

FASTA53459,488
        10         20         30         40         50         60 
MSSSHQVPQW LDQATFYEIY PQSFADSNAD GIGDIPGIIE HLDYLLQLGC NAIWLNPLYE 

        70         80         90        100        110        120 
SPFRDAGYDI SDYKKVAARY GTNDDLAALF AAAHARGMHV LLDLVPGHTS NEHPWFRQSA 

       130        140        150        160        170        180 
TDSPNLYDDR YIWTGNWIEG GDGLPFIGGE EARDGAYIVN FFAFQPALNY GFAHPRKGWQ 

       190        200        210        220        230        240 
APALGDEALR TCDAMLDVMR FWLDMGADGF RVDMADSLVK GDDEGKPYTI RTWQYMLGQI 

       250        260        270        280        290        300 
RGEYPEAAFV SEWGRPDEAF EAGFDMDFYL DWRWDGVANG YSMLLRDTDT PMLRDGDHSY 

       310        320        330        340        350        360 
FNADSGTSIV PFLGEYEPRL EAARKAHAYF DLITCNHDTM RLVPRLTTRE LALAYSTIFL 

       370        380        390        400        410        420 
MPGVPFIYYG DEIGMRYRNL PGKEGGYTRT GSRTPMQWDN SANHGFSQAA ADALYLPVDE 

       430        440        450        460        470        480 
REDAPTVAAA VADGNSLWHH MHAALEQRRS TPAFAPDADF SVLFAEEGRR PFVFKRAKDG 

       490        500        510        520        530 
VSAIVAVNPG RDGETVTLPD DDGSETRTIT LNIGGAVLDG TTLTLPPQSF AVLQ 

« Hide

References

[1]"Bifidobacterium animalis subsp. lactis ATCC 27673 Is a Genomically Unique Strain within Its Conserved Subspecies."
Loquasto J.R., Barrangou R., Dudley E.G., Stahl B., Chen C., Roberts R.F.
Appl. Environ. Microbiol. 79:6903-6910(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 27673 EMBL AGW85730.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003941 Genomic DNA. Translation: AGW85730.1.
RefSeqYP_008606712.1. NC_022523.1.

3D structure databases

ProteinModelPortalU3QC62.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGW85730; AGW85730; BLAC_07795.
GeneID17112931.
KEGGbanl:BLAC_07795.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameU3QC62_BIFAN
AccessionPrimary (citable) accession number: U3QC62
Entry history
Integrated into UniProtKB/TrEMBL: December 11, 2013
Last sequence update: December 11, 2013
Last modified: June 11, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)