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Protein
Submitted name:

Uncharacterized protein

Gene

F13A1

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cofactori

Note: Binds 1 calcium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei321 – 3211UniRule annotation
Active sitei380 – 3801UniRule annotation
Active sitei403 – 4031UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: Ensembl

GO - Biological processi

  1. blood coagulation Source: Ensembl
  2. peptide cross-linking Source: Ensembl
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:F13A1Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
ProteomesiUP000016665 Componenti: Unplaced

Subcellular locationi

GO - Cellular componenti

  1. blood microparticle Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119108.
KOiK03917.
OMAiCEEDAVY.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

U3KFI9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSETTSTNEE NKLPLNGRRA IPPNYSNDEE NEVPEMEAFG LIPRGFNPRD
60 70 80 90 100
YLRVVDIYMF KEPQEINKQE HHTDKYYNPK LIVRRGQAFQ IQIDFNRPYK
110 120 130 140 150
PETDQFWLEF LMGRYPQQNK GTYIPVVVGN VLKPGQWGAK IIHRENNSIR
160 170 180 190 200
LSIMSSATCI IGKFRLYVAV LTPYGILRTR RNSATDTYIL FNPWCQLDAV
210 220 230 240 250
YMDDEKERQE YVLNDVGIVF HGNVEDVKSR SWSYGQFEEN ILDACLFLMD
260 270 280 290 300
KAELELSGRG NPIKICRVAS AVINSRDEDG VIAGSWNNSY DYGVAPSAWT
310 320 330 340 350
GSVDILLEYY SSKQPVRYGQ CWVFAGVFNT FLRCLGIPAR LITNYSSAHD
360 370 380 390 400
NNANLRLDFF LDDEGKVDTR LTKDSVWNYH CWNEAWMTRP DLPVGFGGWQ
410 420 430 440 450
VVDGTPQETS DGMYRCGPAS VQAIKHGHVC FQFDAPFVYA EVNSDIFYTR
460 470 480 490 500
VEKNGAQVVE KIDTTRIGQL IVTKEVGGDG MVDITEEYKF REGSDEERLA
510 520 530 540 550
LETAVMYGVK KQSVQDTTYQ PQTDVDMDFQ AQKAVLGNDF KVTITFRNKS
560 570 580 590 600
RNSYTATTYL SGNIVFYTGV TKSEFKKHSF SAKLEPSSSS SFNIVIKSSE
610 620 630 640 650
YMSELLEQAS FHFFVTARIN ETGKILAVQK AVMLEIPTLR IKTKGELVAG
660 670 680 690 700
KEASVIVEFT NPLKQTLENV TLRLEGPGVL RTIKKEFGRT PMNSTLTWEV
710 720 730
KFFPMRPGLR KLIASLNSNA LRHVYGELNV QIQKP
Length:735
Mass (Da):83,679
Last modified:November 13, 2013 - v1
Checksum:i77B858174C153A73
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000234 Genomic DNA. No translation available.
RefSeqiXP_005041592.1. XM_005041535.1.

Genome annotation databases

EnsembliENSFALT00000013850; ENSFALP00000013793; ENSFALG00000013198.
GeneIDi101811826.
KEGGifab:101811826.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000234 Genomic DNA. No translation available.
RefSeqiXP_005041592.1. XM_005041535.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSFALT00000013850; ENSFALP00000013793; ENSFALG00000013198.
GeneIDi101811826.
KEGGifab:101811826.

Organism-specific databases

CTDi2162.

Phylogenomic databases

GeneTreeiENSGT00760000119108.
KOiK03917.
OMAiCEEDAVY.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
  2. Smeds L., Ellegren H.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (SEP-2013) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiU3KFI9_FICAL
AccessioniPrimary (citable) accession number: U3KFI9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: February 4, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.