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Protein
Submitted name:

Transmembrane protein 116

Gene

TMEM116

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane protein 116Imported
Gene namesi
Name:TMEM116Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 45HelicalSequence analysisAdd BLAST26
Transmembranei57 – 78HelicalSequence analysisAdd BLAST22
Transmembranei98 – 115HelicalSequence analysisAdd BLAST18
Transmembranei136 – 157HelicalSequence analysisAdd BLAST22
Transmembranei203 – 226HelicalSequence analysisAdd BLAST24
Transmembranei258 – 282HelicalSequence analysisAdd BLAST25
Transmembranei288 – 313HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 311G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST277

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000003209.
OMAiFFCCWGP.
OrthoDBiEOG091G0DBN.

Family and domain databases

InterProiView protein in InterPro
IPR022343. GCR1-cAMP_receptor.
IPR017452. GPCR_Rhodpsn_7TM.
PRINTSiPR02001. GCR1CAMPR.
PROSITEiView protein in PROSITE
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.

Sequencei

Sequence statusi: Complete.

U3K2X3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALPAEVERL DGGWQEVYSA LQWIQFTMAM LSVVGSSSII AYAVFQNVVR
60 70 80 90 100
SPEVRPLFYL SLSDLFLGMC WLAGAVLYSS PTSQQDLICY NLQATAQIFY
110 120 130 140 150
VASFLYTVNY TWHLYMDLKM KYNQNLFRVP LQVVDYASCI GRIATILSSL
160 170 180 190 200
IPFLLMVPVF CLGNSSNCYQ NFSQKHGCLL MHTEVAEPPS EPPSPSGSVC
210 220 230 240 250
RAVHFYGIGV FLISFLTSFV AILVILSQAR GLYKRFVNST GFLGDQQWAM
260 270 280 290 300
IKMVEQRVVF YPVAFFCCWA PAVLLGMLKL TASTTSKIYM ALLILQALTA
310 320 330 340 350
ASQGLLNCLV YGWTQHVFLS LKRGSRRDVD TQTPLLRSQK KFYSSTAPSS
360
PPDTAGSSST LL
Length:362
Mass (Da):40,308
Last modified:November 13, 2013 - v1
Checksum:iDD97B7B16C351215
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000195 Genomic DNA. No translation available.
RefSeqiXP_005055118.2. XM_005055061.2.

Genome annotation databases

EnsembliENSFALT00000009417; ENSFALP00000009377; ENSFALG00000008987.
GeneIDi101806377.

Similar proteinsi

Entry informationi

Entry nameiU3K2X3_FICAL
AccessioniPrimary (citable) accession number: U3K2X3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: November 22, 2017
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported