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Protein
Submitted name:

Protein O-mannosyltransferase 1

Gene

POMT1

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyltransferase 1Imported
Gene namesi
Name:POMT1Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei68 – 88HelicalSequence analysisAdd BLAST21
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei126 – 142HelicalSequence analysisAdd BLAST17
Transmembranei154 – 174HelicalSequence analysisAdd BLAST21
Transmembranei186 – 203HelicalSequence analysisAdd BLAST18
Transmembranei208 – 226HelicalSequence analysisAdd BLAST19
Transmembranei246 – 267HelicalSequence analysisAdd BLAST22
Transmembranei575 – 597HelicalSequence analysisAdd BLAST23
Transmembranei639 – 659HelicalSequence analysisAdd BLAST21
Transmembranei671 – 691HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini296 – 359MIRInterPro annotationAdd BLAST64
Domaini370 – 427MIRInterPro annotationAdd BLAST58
Domaini431 – 491MIRInterPro annotationAdd BLAST61

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00900000141137.
OMAiWWIVKDP.
OrthoDBiEOG091G02QX.

Family and domain databases

InterProiView protein in InterPro
IPR027005. GlyclTrfase_39-like.
IPR003342. Glyco_trans_39/83.
IPR036300. MIR_dom_sf.
IPR016093. MIR_motif.
IPR032421. PMT_4TMC.
PANTHERiPTHR10050. PTHR10050. 1 hit.
PfamiView protein in Pfam
PF02815. MIR. 1 hit.
PF02366. PMT. 1 hit.
PF16192. PMT_4TMC. 1 hit.
SMARTiView protein in SMART
SM00472. MIR. 3 hits.
SUPFAMiSSF82109. SSF82109. 1 hit.
PROSITEiView protein in PROSITE
PS50919. MIR. 3 hits.

Sequencei

Sequence statusi: Complete.

U3JFG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGFLKEPVV VTAEINVNLV ALSVMGLISR LWGLCYPRAV VFDEVYYGQF
60 70 80 90 100
VSLYMKRIFF VDDSGPPFGH MLLALGGYLG GFDGNFLWNR IGAEYSMNVP
110 120 130 140 150
VWSLRLLPAL AGALCVPLAY QILVELHFSH CAALGAALLI LLENSLITQS
160 170 180 190 200
RFMLLESILI FFILLAVLSY LKFYNLQKHS AFSGSWWFWL LLTGVACSCA
210 220 230 240 250
VGVKYMGLFT YMLLLATAGL HFWHMIGDQN LSNISLLCHF LARGLALIII
260 270 280 290 300
PMGLYLSFFY VHLALLYRSG PHDQIMTSAF QASLEGGLAR ITQGQPLEVA
310 320 330 340 350
YGSQITLRNV LGKPVQCWLH SHTNTYPIRY ENGRGSSHQQ QVTCYPFKDV
360 370 380 390 400
NNWWIVKDPG MQQLVVSNPP RPVRHGHIVQ LVHGITTRYL NTHDVAAPLS
410 420 430 440 450
PHSQEVSCYI DYNISMPAQN LWRVEIVNRE SDTDVWKTIL SEVRFVHVNT
460 470 480 490 500
SAVLKLSGAS LPEWGYRQLE VVGEKLSKGY HQSMVWNVEE HRYGKSQEQK
510 520 530 540 550
EREVELHSPT QMDISKNLSF MAKFTELQWK ILTLKNEDTE HKYSSSALDW
560 570 580 590 600
ITMDTNIAYW LHPTSGAQIH LLGNVATWAS ANAAALVYLC LSLWYLLRRR
610 620 630 640 650
RKIYDIPEDA WQLWTSAGGV CAGGWAVNYL PFFLMEKTLF LYHYLPAVTF
660 670 680 690 700
QILLIPVVLQ HLGDHLCRSV LLKSMLSALT VAWLSSVYFV YCTFSPLSYG
710 720
QPALSPTELR ALRWKDTWNI LIRKQ
Length:725
Mass (Da):82,352
Last modified:November 13, 2013 - v1
Checksum:iBCE61BFFF098E28A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000702 Genomic DNA. No translation available.
RefSeqiXP_005055636.1. XM_005055579.2.

Genome annotation databases

EnsembliENSFALT00000001528; ENSFALP00000001519; ENSFALG00000001457.
GeneIDi101818924.

Similar proteinsi

Entry informationi

Entry nameiU3JFG5_FICAL
AccessioniPrimary (citable) accession number: U3JFG5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: November 22, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported