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Protein
Submitted name:

Protein O-mannosyltransferase 1

Gene

POMT1

Organism
Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein O-mannosyltransferase 1Imported
Gene namesi
Name:POMT1Imported
OrganismiFicedula albicollis (Collared flycatcher) (Muscicapa albicollis)Imported
Taxonomic identifieri59894 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesMuscicapidaeFicedula
Proteomesi
  • UP000016665 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei68 – 88HelicalSequence analysisAdd BLAST21
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei126 – 142HelicalSequence analysisAdd BLAST17
Transmembranei154 – 174HelicalSequence analysisAdd BLAST21
Transmembranei186 – 203HelicalSequence analysisAdd BLAST18
Transmembranei208 – 226HelicalSequence analysisAdd BLAST19
Transmembranei246 – 267HelicalSequence analysisAdd BLAST22
Transmembranei575 – 597HelicalSequence analysisAdd BLAST23
Transmembranei639 – 659HelicalSequence analysisAdd BLAST21
Transmembranei671 – 691HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini296 – 359MIRInterPro annotationAdd BLAST64
Domaini370 – 427MIRInterPro annotationAdd BLAST58
Domaini431 – 491MIRInterPro annotationAdd BLAST61

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00910000144161
KOiK00728
OMAiWWIVKDP
OrthoDBiEOG091G02QX

Family and domain databases

InterProiView protein in InterPro
IPR027005 GlyclTrfase_39-like
IPR003342 Glyco_trans_39/83
IPR036300 MIR_dom_sf
IPR016093 MIR_motif
IPR032421 PMT_4TMC
PANTHERiPTHR10050 PTHR10050, 1 hit
PfamiView protein in Pfam
PF02815 MIR, 1 hit
PF02366 PMT, 1 hit
PF16192 PMT_4TMC, 1 hit
SMARTiView protein in SMART
SM00472 MIR, 3 hits
SUPFAMiSSF82109 SSF82109, 1 hit
PROSITEiView protein in PROSITE
PS50919 MIR, 3 hits

Sequencei

Sequence statusi: Complete.

U3JFG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGFLKEPVV VTAEINVNLV ALSVMGLISR LWGLCYPRAV VFDEVYYGQF
60 70 80 90 100
VSLYMKRIFF VDDSGPPFGH MLLALGGYLG GFDGNFLWNR IGAEYSMNVP
110 120 130 140 150
VWSLRLLPAL AGALCVPLAY QILVELHFSH CAALGAALLI LLENSLITQS
160 170 180 190 200
RFMLLESILI FFILLAVLSY LKFYNLQKHS AFSGSWWFWL LLTGVACSCA
210 220 230 240 250
VGVKYMGLFT YMLLLATAGL HFWHMIGDQN LSNISLLCHF LARGLALIII
260 270 280 290 300
PMGLYLSFFY VHLALLYRSG PHDQIMTSAF QASLEGGLAR ITQGQPLEVA
310 320 330 340 350
YGSQITLRNV LGKPVQCWLH SHTNTYPIRY ENGRGSSHQQ QVTCYPFKDV
360 370 380 390 400
NNWWIVKDPG MQQLVVSNPP RPVRHGHIVQ LVHGITTRYL NTHDVAAPLS
410 420 430 440 450
PHSQEVSCYI DYNISMPAQN LWRVEIVNRE SDTDVWKTIL SEVRFVHVNT
460 470 480 490 500
SAVLKLSGAS LPEWGYRQLE VVGEKLSKGY HQSMVWNVEE HRYGKSQEQK
510 520 530 540 550
EREVELHSPT QMDISKNLSF MAKFTELQWK ILTLKNEDTE HKYSSSALDW
560 570 580 590 600
ITMDTNIAYW LHPTSGAQIH LLGNVATWAS ANAAALVYLC LSLWYLLRRR
610 620 630 640 650
RKIYDIPEDA WQLWTSAGGV CAGGWAVNYL PFFLMEKTLF LYHYLPAVTF
660 670 680 690 700
QILLIPVVLQ HLGDHLCRSV LLKSMLSALT VAWLSSVYFV YCTFSPLSYG
710 720
QPALSPTELR ALRWKDTWNI LIRKQ
Length:725
Mass (Da):82,352
Last modified:November 13, 2013 - v1
Checksum:iBCE61BFFF098E28A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTO01000702 Genomic DNA No translation available.
RefSeqiXP_005055636.1, XM_005055579.2

Genome annotation databases

EnsembliENSFALT00000001528; ENSFALP00000001519; ENSFALG00000001457
GeneIDi101818924
KEGGifab:101818924

Similar proteinsi

Entry informationi

Entry nameiU3JFG5_FICAL
AccessioniPrimary (citable) accession number: U3JFG5
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: March 28, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health