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Protein
Submitted name:

PHD finger protein 21A

Gene

PHF21A

Organism
Anas platyrhynchos (Mallard) (Anas boschas)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AImported
Gene namesi
Name:PHF21AImported
OrganismiAnas platyrhynchos (Mallard) (Anas boschas)Imported
Taxonomic identifieri8839 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeAnseriformesAnatidaeAnas
Proteomesi
  • UP000016666 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini459 – 506PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 28Sequence analysisAdd BLAST28
Coiled coili533 – 571Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063984.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

U3I3T7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NADLKKQLHE LQAKITALSE KQKRVVEQLR KNLIVKQEQP DSKFQIQPLA
60 70 80 90 100
QSENKLQTPQ PQPLQQLQQH HHQQQQQSTA PSPNVIGSQK TVTTASMITT
110 120 130 140 150
KTLPLVLKAA TATMPASVVG QRPTIAMVTA INNNQKAVLS TDAQNAPVNL
160 170 180 190 200
QTTNKVTGPG AEAVQIVAKN TVTLQVQATP QPIKVPQFIP PPRLTPRPNF
210 220 230 240 250
LPQVRPKPVA QNNIPIAPAP PPMLAAPQLI QRPVMLTTKF TPTSLPNSQN
260 270 280 290 300
SIHPVRVVNG QTATIAKTFP MAQLTSIVIA APGTRLAGPQ TVQISKPNIE
310 320 330 340 350
KQTIKPHVEA EEKQTESRTV TPPAAPKPKR EENPQKLAFM VSLGLVTHDH
360 370 380 390 400
LEEIQSKRQE RKRRTTANPV YSGAVFEPER KKSAVTYLNS TMHPGTRKRG
410 420 430 440 450
RPPKYNTVLG FGALTPTSPL SSYPDSPENE KTETTFTFPA AVQPVSLPSP
460 470 480 490 500
SSTDGDIHED FCSVCRKSGQ LLMCDTCSRV YHLDCLDPPL KTIPKGMWIC
510 520 530 540 550
PKCQDQMLKK EEAIPWPGTL AIVHSYIAYK AAKEEEKQKL LKWSSDLKQE
560 570 580 590 600
REQLEQKVKQ LSNSITKCME MKNTILAKQK EMHSSLEKVK QLIRLIQGID
610 620 630 640 650
LSKPINSEVN SVAISNGMDS TNNTNAATST LAPSPSQSCM VNCNKGDETK
Length:650
Mass (Da):71,525
Last modified:November 13, 2013 - v1
Checksum:i0C82E0CC3CA00726
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADON01035566 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSAPLT00000002487; ENSAPLP00000001908; ENSAPLG00000002448.

Similar proteinsi

Entry informationi

Entry nameiU3I3T7_ANAPL
AccessioniPrimary (citable) accession number: U3I3T7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: August 30, 2017
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported