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T2MWQ1

- T2MWQ1_ECOLX

UniProt

T2MWQ1 - T2MWQ1_ECOLX

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Protein
Submitted name:

Alpha-amylase

Gene
malS, ECOPMV1_03909
Organism
Escherichia coli PMV-1
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
ORF Names:ECOPMV1_03909Imported
OrganismiEscherichia coli PMV-1Imported
Taxonomic identifieri1382700 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000016705: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliT2MWQ1.

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

T2MWQ1-1 [UniParc]FASTAAdd to Basket

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MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQLDTRSGT 100
PTLMISLQNT VEPVASLVRE CPKWDGLPLT LDVSATFAEG AAVRDYYSQQ 150
IAIVKNGQIT LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGSE ADLRTLVDSA 300
HQRGIRILFD IVMNHTGYAT LADMQEYQFG ALYLSGDELK KTLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKTDTHAK VIDGFTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
KLQDFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT 650
LSLKQGYGFV REHGDDKVLV IWAGQQ 676
Length:676
Mass (Da):75,772
Last modified:November 13, 2013 - v1
Checksum:iC1E560649F274D34
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HG428755 Genomic DNA. Translation: CDH67240.1.
RefSeqiYP_008573654.1. NC_022370.1.

Genome annotation databases

EnsemblBacteriaiCDH67240; CDH67240; ECOPMV1_03909.
GeneIDi16988310.
KEGGiecoi:ECOPMV1_03909.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HG428755 Genomic DNA. Translation: CDH67240.1 .
RefSeqi YP_008573654.1. NC_022370.1.

3D structure databases

ProteinModelPortali T2MWQ1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CDH67240 ; CDH67240 ; ECOPMV1_03909 .
GeneIDi 16988310.
KEGGi ecoi:ECOPMV1_03909.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the E. coli PMV-1 strain, a model ExPEC strain used for host-pathogen interaction studies."
    Peris-Bondia F., Muraille E., Van Melderen L.
    Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PMV-1Imported.

Entry informationi

Entry nameiT2MWQ1_ECOLX
AccessioniPrimary (citable) accession number: T2MWQ1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: June 11, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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