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T1Y4F8 (T1Y4F8_VIBAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
T1Y4F8 [UniParc].

Last modified November 13, 2013. Version 1.
Checksum: D0C26150A7CC32BA

FASTA45551,981
        10         20         30         40         50         60 
MTNVQPTDVI LHAFDWPYRL VAERAEQIFQ LGYKTVLISP PMKSFKTAQG TKWWQRYQPQ 

        70         80         90        100        110        120 
DYRIIDNQLG NTHDFKQMVE TLTALGLRIY ADVVFNHMAN ESKLRLDLQY PSAQDLASYQ 

       130        140        150        160        170        180 
NKSDEYQALR LFGDLTQPLF DKDDFVEAFG IKDWKDRWQV QNGRITGGAH DPGLPTLRDN 

       190        200        210        220        230        240 
EHVVVQQQAY LRALKALGVK GFRIDAAKHM SIEHLKKVWA DDITQGMHIF GEIITDGGAT 

       250        260        270        280        290        300 
KEEYQLFLEP YLQETKLGAY DFPLFQTVYD ALQTKGSLKW LIDPYCFGQA LSNNRAITFT 

       310        320        330        340        350        360 
ITHDIPNNAV FADLVMDEAL ENIAYSYILG RDGGVPLIYT DLNTSGILNH AGLPRWQEAW 

       370        380        390        400        410        420 
CSPQMAACIV FHNKMHALPM KTLEASDDLL VFSRGKEGIV VLNKSQRSQR VEIDWTNPML 

       430        440        450 
ELFTKQQYQP NNQKIVMDIA ARSSAMLCRL SNDGE 

« Hide

References

[1]"Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China."
Li G., Mo Z., Li J., Xiao P., Hao B.
Genome Announc. 1:e00769-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M3 EMBL AGU59245.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006700 Genomic DNA. Translation: AGU59245.1.
RefSeqYP_008489466.1. NC_022224.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGU59245; AGU59245; N175_15770.
GeneID16741181.
KEGGlag:N175_15770.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameT1Y4F8_VIBAN
AccessionPrimary (citable) accession number: T1Y4F8
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: July 9, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)