Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

T1Y4F8

- T1Y4F8_VIBAN

UniProt

T1Y4F8 - T1Y4F8_VIBAN

Protein

Alpha-amylase

Gene

N175_15770

Organism
Listonella anguillarum M3
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (13 Nov 2013)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:N175_15770Imported
    OrganismiListonella anguillarum M3Imported
    Taxonomic identifieri882944 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000017459: Chromosome 2

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    T1Y4F8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTNVQPTDVI LHAFDWPYRL VAERAEQIFQ LGYKTVLISP PMKSFKTAQG    50
    TKWWQRYQPQ DYRIIDNQLG NTHDFKQMVE TLTALGLRIY ADVVFNHMAN 100
    ESKLRLDLQY PSAQDLASYQ NKSDEYQALR LFGDLTQPLF DKDDFVEAFG 150
    IKDWKDRWQV QNGRITGGAH DPGLPTLRDN EHVVVQQQAY LRALKALGVK 200
    GFRIDAAKHM SIEHLKKVWA DDITQGMHIF GEIITDGGAT KEEYQLFLEP 250
    YLQETKLGAY DFPLFQTVYD ALQTKGSLKW LIDPYCFGQA LSNNRAITFT 300
    ITHDIPNNAV FADLVMDEAL ENIAYSYILG RDGGVPLIYT DLNTSGILNH 350
    AGLPRWQEAW CSPQMAACIV FHNKMHALPM KTLEASDDLL VFSRGKEGIV 400
    VLNKSQRSQR VEIDWTNPML ELFTKQQYQP NNQKIVMDIA ARSSAMLCRL 450
    SNDGE 455
    Length:455
    Mass (Da):51,981
    Last modified:November 13, 2013 - v1
    Checksum:iD0C26150A7CC32BA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006700 Genomic DNA. Translation: AGU59245.1.
    RefSeqiYP_008489466.1. NC_022224.1.

    Genome annotation databases

    EnsemblBacteriaiAGU59245; AGU59245; N175_15770.
    GeneIDi16741181.
    KEGGilag:N175_15770.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006700 Genomic DNA. Translation: AGU59245.1 .
    RefSeqi YP_008489466.1. NC_022224.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGU59245 ; AGU59245 ; N175_15770 .
    GeneIDi 16741181.
    KEGGi lag:N175_15770.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China."
      Li G., Mo Z., Li J., Xiao P., Hao B.
      Genome Announc. 1:e00769-13(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M3Imported.

    Entry informationi

    Entry nameiT1Y4F8_VIBAN
    AccessioniPrimary (citable) accession number: T1Y4F8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 13, 2013
    Last sequence update: November 13, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3