Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

T1Y4F8

- T1Y4F8_VIBAN

UniProt

T1Y4F8 - T1Y4F8_VIBAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Alpha-amylase

Gene

N175_15770

Organism
Listonella anguillarum M3
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:N175_15770Imported
OrganismiListonella anguillarum M3Imported
Taxonomic identifieri882944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000017459: Chromosome 2

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

T1Y4F8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNVQPTDVI LHAFDWPYRL VAERAEQIFQ LGYKTVLISP PMKSFKTAQG
60 70 80 90 100
TKWWQRYQPQ DYRIIDNQLG NTHDFKQMVE TLTALGLRIY ADVVFNHMAN
110 120 130 140 150
ESKLRLDLQY PSAQDLASYQ NKSDEYQALR LFGDLTQPLF DKDDFVEAFG
160 170 180 190 200
IKDWKDRWQV QNGRITGGAH DPGLPTLRDN EHVVVQQQAY LRALKALGVK
210 220 230 240 250
GFRIDAAKHM SIEHLKKVWA DDITQGMHIF GEIITDGGAT KEEYQLFLEP
260 270 280 290 300
YLQETKLGAY DFPLFQTVYD ALQTKGSLKW LIDPYCFGQA LSNNRAITFT
310 320 330 340 350
ITHDIPNNAV FADLVMDEAL ENIAYSYILG RDGGVPLIYT DLNTSGILNH
360 370 380 390 400
AGLPRWQEAW CSPQMAACIV FHNKMHALPM KTLEASDDLL VFSRGKEGIV
410 420 430 440 450
VLNKSQRSQR VEIDWTNPML ELFTKQQYQP NNQKIVMDIA ARSSAMLCRL

SNDGE
Length:455
Mass (Da):51,981
Last modified:November 13, 2013 - v1
Checksum:iD0C26150A7CC32BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006700 Genomic DNA. Translation: AGU59245.1.
RefSeqiYP_008489466.1. NC_022224.1.

Genome annotation databases

EnsemblBacteriaiAGU59245; AGU59245; N175_15770.
GeneIDi16741181.
KEGGilag:N175_15770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006700 Genomic DNA. Translation: AGU59245.1 .
RefSeqi YP_008489466.1. NC_022224.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGU59245 ; AGU59245 ; N175_15770 .
GeneIDi 16741181.
KEGGi lag:N175_15770.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China."
    Li G., Mo Z., Li J., Xiao P., Hao B.
    Genome Announc. 1:e00769-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M3Imported.

Entry informationi

Entry nameiT1Y4F8_VIBAN
AccessioniPrimary (citable) accession number: T1Y4F8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: October 1, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3