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T1Y4F8

- T1Y4F8_VIBAN

UniProt

T1Y4F8 - T1Y4F8_VIBAN

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Protein
Alpha-amylase
Gene
N175_15770
Organism
Listonella anguillarum M3
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:N175_15770Imported
OrganismiListonella anguillarum M3Imported
Taxonomic identifieri882944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000017459: Chromosome 2

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

T1Y4F8-1 [UniParc]FASTAAdd to Basket

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MTNVQPTDVI LHAFDWPYRL VAERAEQIFQ LGYKTVLISP PMKSFKTAQG    50
TKWWQRYQPQ DYRIIDNQLG NTHDFKQMVE TLTALGLRIY ADVVFNHMAN 100
ESKLRLDLQY PSAQDLASYQ NKSDEYQALR LFGDLTQPLF DKDDFVEAFG 150
IKDWKDRWQV QNGRITGGAH DPGLPTLRDN EHVVVQQQAY LRALKALGVK 200
GFRIDAAKHM SIEHLKKVWA DDITQGMHIF GEIITDGGAT KEEYQLFLEP 250
YLQETKLGAY DFPLFQTVYD ALQTKGSLKW LIDPYCFGQA LSNNRAITFT 300
ITHDIPNNAV FADLVMDEAL ENIAYSYILG RDGGVPLIYT DLNTSGILNH 350
AGLPRWQEAW CSPQMAACIV FHNKMHALPM KTLEASDDLL VFSRGKEGIV 400
VLNKSQRSQR VEIDWTNPML ELFTKQQYQP NNQKIVMDIA ARSSAMLCRL 450
SNDGE 455
Length:455
Mass (Da):51,981
Last modified:November 13, 2013 - v1
Checksum:iD0C26150A7CC32BA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006700 Genomic DNA. Translation: AGU59245.1.
RefSeqiYP_008489466.1. NC_022224.1.

Genome annotation databases

EnsemblBacteriaiAGU59245; AGU59245; N175_15770.
GeneIDi16741181.
KEGGilag:N175_15770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006700 Genomic DNA. Translation: AGU59245.1 .
RefSeqi YP_008489466.1. NC_022224.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGU59245 ; AGU59245 ; N175_15770 .
GeneIDi 16741181.
KEGGi lag:N175_15770.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China."
    Li G., Mo Z., Li J., Xiao P., Hao B.
    Genome Announc. 1:e00769-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M3Imported.

Entry informationi

Entry nameiT1Y4F8_VIBAN
AccessioniPrimary (citable) accession number: T1Y4F8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: September 3, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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