Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

T1Y3C4

- T1Y3C4_VIBAN

UniProt

T1Y3C4 - T1Y3C4_VIBAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Alpha-amylase

Gene

N175_17850

Organism
Listonella anguillarum M3
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
ORF Names:N175_17850Imported
OrganismiListonella anguillarum M3Imported
Taxonomic identifieri882944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000017459: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

T1Y3C4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKFSTLTLAL CAAAPVVFAA PNLTISTTTT SRDFPLDAKT PLVIPLTKES
60 70 80 90 100
YTIKVSGIES QCSAPAQQSI KFNAPIALNC GQETELPLTI RFTGDYAFAY
110 120 130 140 150
DGEQQTLTFV RQAKKSTTSK FKRPIPSVSC EQYQGGEVTL QLGNTFPDGT
160 170 180 190 200
RLKETFTGQI LSVKNSQVTL MPSPTSGGLV LLAPATDAAS EPFTYRNATI
210 220 230 240 250
YFVMVDRFNN GDPSNDNSYG RKKDGKEEVG TFHGGDLKGV IAKLDYIKSL
260 270 280 290 300
GTDAIWLSPI VEQVHGFVGG GDSGSFPFYA YHGYWTRDFT KIDQNFGDEE
310 320 330 340 350
DLKTLVTEAH KRGIKILLDA VLNHSGYATL ADLQFDQIEV VNPQNLPQKW
360 370 380 390 400
VDWMPKAEEN WHSYNQSIDY QSANWSLWWG KDWVRAGLPG YQKPGSSDIT
410 420 430 440 450
MTLAGLPDFR TESTQAVTPP QWLLNNPGTR VVAREQYSVA DYLIEWQTDW
460 470 480 490 500
VKRFGIDGYR VDTVKHVEGE VWRRLKSEAS RSLDAWREQN GQQGQPFWMM
510 520 530 540 550
GEVWGHSAYR SPYFDDGFDA LINFDMQKRV DKGAACLSQM AMVYRDYAQT
560 570 580 590 600
LAKYPDFTPV SYLSSHDTEL FFSRFNSFEM QRNAANALLL APGAVQIYYG
610 620 630 640 650
DEVARQVGPY ADDFHQGTRS DMVWSLDEER QALLKHWQTL GQFRQSHPAI
660 670 680
GAGIHHEIEQ QNAYLFSRTL NNDRVVIAFV GR
Length:682
Mass (Da):76,639
Last modified:November 13, 2013 - v1
Checksum:iED0CD17974565B00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006700 Genomic DNA. Translation: AGU59602.1.
RefSeqiYP_008489869.1. NC_022224.1.

Genome annotation databases

EnsemblBacteriaiAGU59602; AGU59602; N175_17850.
GeneIDi16741597.
KEGGilag:N175_17850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006700 Genomic DNA. Translation: AGU59602.1 .
RefSeqi YP_008489869.1. NC_022224.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGU59602 ; AGU59602 ; N175_17850 .
GeneIDi 16741597.
KEGGi lag:N175_17850.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China."
    Li G., Mo Z., Li J., Xiao P., Hao B.
    Genome Announc. 1:e00769-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M3Imported.

Entry informationi

Entry nameiT1Y3C4_VIBAN
AccessioniPrimary (citable) accession number: T1Y3C4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: October 1, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3